RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PRELPP51888 382 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 NR1D2Q14995 579 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 TTC39BQ5VTQ0 682 aaPredicted RBP19.75■□□□□ 0.75
HMGA1-205ENST00000447654 OGFOD2Q6N063 350 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 ITIH5Q86UX2 942 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 LRRC49Q8IUZ0 686 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 ARHGEF19Q8IW93 802 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 TMEM174Q8WUU8 243 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 CNDP2Q96KP4 475 aaKnown RBP19.75■□□□□ 0.75
HMGA1-205ENST00000447654 VPS33BQ9H267 617 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 DNAJC28Q9NX36 388 aa19.75■□□□□ 0.75
HMGA1-205ENST00000447654 KRBA1A5PL33 1030 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 NFIBO00712 420 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 XPO1O14980 1071 aaKnown RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 RSL1D1O76021 490 aaKnown RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 ASNSP08243 561 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 OXA1LQ15070 435 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 TRIM16LQ309B1 348 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 DENND5BQ6ZUT9 1274 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 SAMD7Q7Z3H4 446 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 HAUS6Q7Z4H7 955 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 ATP6V0D2Q8N8Y2 350 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 SLC16A10Q8TF71 515 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 TAMM41Q96BW9 452 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 MROQ9BYG7 248 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 PLA2G6O60733 806 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 HSD17B4P51659 736 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 CBLBQ13191 982 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 PDE1CQ14123 709 aaPredicted RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 PDK1Q15118 436 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 CEP55Q53EZ4 464 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 LGSNQ5TDP6 509 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 RINT1Q6NUQ1 792 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 TPH2Q8IWU9 490 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 IL31RAQ8NI17 732 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 PIWIL2Q8TC59 973 aaKnown RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 SHC3Q92529 594 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 C1orf50Q9BV19 199 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 EHD1Q9H4M9 534 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 RPF2Q9H7B2 306 aaKnown RBP19.74■□□□□ 0.75
HMGA1-205ENST00000447654 OLAHQ9NV23 265 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 FEM1BQ9UK73 627 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 DNPEPQ9ULA0 475 aa19.74■□□□□ 0.75
HMGA1-205ENST00000447654 SORBS2O94875 1100 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 ZNF26P17031 533 aaPredicted RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 KRT39Q6A163 491 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 KRT80Q6KB66 452 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 RCOR2Q8IZ40 523 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 EBF4Q9BQW3 602 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 CYP4F11Q9HBI6 524 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 XAB2Q9HCS7 855 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 AGPAT3Q9NRZ7 376 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.73■□□□□ 0.753e-28■■■□□ 14.8
HMGA1-205ENST00000447654 MRPL11Q9Y3B7 192 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 EMSYQ7Z589 1322 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 ANKRD34BA5PLL1 514 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 KRT37O76014 449 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 BPGMP07738 259 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 HSPA8P11142 646 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 CYP11B1P15538 503 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 ITGB5P18084 799 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 PTPN7P35236 360 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 BMXP51813 675 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 MFAP3P55082 362 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 DALRD3Q5D0E6 543 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 FSCBQ5H9T9 825 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 ANGEL2Q5VTE6 544 aaKnown RBP19.73■□□□□ 0.75
HMGA1-205ENST00000447654 C16orf89Q6UX73 402 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 ISLR2Q6UXK2 745 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 LYSMD3Q7Z3D4 306 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 FAM160B2Q86V87 743 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 C11orf74Q86VG3 221 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 MCF2L2Q86YR7 1114 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 FBXO36Q8NEA4 188 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 RIC8BQ9NVN3 520 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 FZD1Q9UP38 647 aa19.73■□□□□ 0.75
HMGA1-205ENST00000447654 TRIM64A6NGJ6 449 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 MTMR2Q13614 643 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 AGAP7PQ5VUJ5 663 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 MMAAQ8IVH4 418 aaKnown RBP19.72■□□□□ 0.75
HMGA1-205ENST00000447654 GALNT4Q8N4A0 578 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 GLIS1Q8NBF1 620 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 TNIP2Q8NFZ5 429 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 TFB1MQ8WVM0 346 aaKnown RBP19.72■□□□□ 0.75
HMGA1-205ENST00000447654 CLEC4DQ8WXI8 215 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 WRNIP1Q96S55 665 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 DCUN1D5Q9BTE7 237 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 ANKRD60Q9BZ19 345 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 CAAP1Q9H8G2 361 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 MOV10Q9HCE1 1003 aaKnown RBP19.72■□□□□ 0.75
HMGA1-205ENST00000447654 PNPLA8Q9NP80 782 aa19.72■□□□□ 0.75
HMGA1-205ENST00000447654 GIPC1O14908 333 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 KMOO15229 486 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 NFX1Q12986 1120 aaKnown RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 FLOT2Q14254 428 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 CYP2A13Q16696 494 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 Q3C1V9 767 aa19.71■□□□□ 0.75
HMGA1-205ENST00000447654 LSM12Q3MHD2 195 aaKnown RBP19.71■□□□□ 0.75
HMGA1-205ENST00000447654 STXBP5Q5T5C0 1151 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms