RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 KLF8O95600 359 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 POLR2MP0CAP2 368 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 TOP1P11387 765 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 NOVP48745 357 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CSNK1EP49674 416 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 ACADVLP49748 655 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 ARPP19P56211 112 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SPIRE1Q08AE8 756 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 NR1I3Q14994 352 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 DPY19L1Q2PZI1 675 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 EFCAB12Q6NXP0 572 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SLC36A4Q6YBV0 504 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SPNS3Q6ZMD2 512 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 TAOK1Q7L7X3 1001 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CXXC5Q7LFL8 322 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 PLPPR4Q7Z2D5 763 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 MRPL10Q7Z7H8 261 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 GATAD2AQ86YP4 633 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 WDR63Q8IWG1 891 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SFTPA1Q8IWL2 248 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 ALLCQ8N6M5 410 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 LINC01465Q8N7H1 131 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 C19orf47Q8N9M1 422 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 TXNDC5Q8NBS9 432 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 GIMAP8Q8ND71 665 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 RSPH1Q8WYR4 309 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CD101Q93033 1021 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 OSBP2Q969R2 916 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 GPRASP2Q96D09 838 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SGF29Q96ES7 293 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CNDP2Q96KP4 475 aaKnown RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CCNL2Q96S94 520 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-205ENST00000447267 MTA3Q9BTC8 594 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 LGR4Q9BXB1 951 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 JMJD4Q9H9V9 463 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 CD93Q9NPY3 652 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 ASCL3Q9NQ33 180 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 HDAC5Q9UQL6 1122 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 VWA8A3KMH1 1905 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 MYH7P12883 1935 aa5.5□□□□□ -1.53
SDCBP-205ENST00000447267 SDK2Q58EX2 2172 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 MTCL1Q9Y4B5 1905 aaKnown RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ARL5CA6NH57 179 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 SYNCRIPO60506 623 aaKnown RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 USP12O75317 370 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 FAM155BO75949 473 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 GJB6O95452 261 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 LDOC1O95751 146 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 MT-CO3P00414 261 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 L1CAMP32004 1257 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ELF1P32519 619 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 GJA4P35212 333 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 NOP2P46087 812 aaKnown RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 GPC3P51654 580 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 CORO7P57737 925 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ERVPABLB-1P60509 514 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ACTR2P61160 394 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 GHRHRQ02643 423 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 KIF19Q2TAC6 998 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF484Q5JVG2 852 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 PRAMEF14Q5SWL7 426 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 MBLAC2Q68D91 279 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 AACSQ86V21 672 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 PRIMA1Q86XR5 153 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 NT5DC4Q86YG4 428 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 FAM114A1Q8IWE2 563 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ARHGEF39Q8N4T4 335 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 DCBLD1Q8N8Z6 715 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 CXorf38Q8TB03 319 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 FNIP1Q8TF40 1166 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 SSH1Q8WYL5 1049 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF419Q96HQ0 510 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 LURAP1Q96LR2 239 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ZNF512Q96ME7 567 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 MMS19Q96T76 1030 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 TMEM245Q9H330 911 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 CYP4F11Q9HBI6 524 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 LUC7LQ9NQ29 371 aaKnown RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 THG1LQ9NWX6 298 aaKnown RBP5.49□□□□□ -1.53
SDCBP-205ENST00000447267 ANAPC2Q9UJX6 822 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 TBX20Q9UMR3 447 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 SLCO1B1Q9Y6L6 691 aa5.49□□□□□ -1.53
SDCBP-205ENST00000447267 HNRNPRO43390 633 aaKnown RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 PRICKLE3O43900 615 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 VPS4BO75351 444 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 STAM2O75886 525 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 DDAH2O95865 285 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 C1SP09871 688 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SNHG28P0DPA3 235 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 MLH1P40692 756 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 NASPP49321 788 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-205ENST00000447267 MCM2P49736 904 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 RAB27AP51159 221 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SLURP1P55000 103 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 SLC7A5Q01650 507 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 POU4F1Q01851 419 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 PPARAQ07869 468 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 TWF1Q12792 350 aa5.48□□□□□ -1.53
SDCBP-205ENST00000447267 TCEAL1Q15170 157 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms