RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 FGFR1P11362 822 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 KRT13P13646 458 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 AXLP30530 894 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TRPC1P48995 793 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 EFNA5P52803 228 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ARPC4P59998 168 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 COASYQ13057 564 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 MAPK6Q16659 721 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TWF2Q6IBS0 349 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 C11orf63Q6NUN7 778 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 CCDC137Q6PK04 289 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 OTOAQ7RTW8 1153 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TRABD2AQ86V40 505 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 UBL4BQ8N7F7 174 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 PYROXD1Q8WU10 500 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 HPS3Q969F9 1004 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 SGF29Q96ES7 293 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 KLHL4Q9C0H6 718 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 IKZF4Q9H2S9 585 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 ELAC1Q9H777 363 aaKnown RBP13.53□□□□□ -0.24
DDX56-206ENST00000446987 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 MTUS1Q9ULD2 1270 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 AK5Q9Y6K8 562 aa13.53□□□□□ -0.24
DDX56-206ENST00000446987 K7ENM7 598 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 FBP2O00757 339 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 CASQ2O14958 399 aaPredicted RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 TLL1O43897 1013 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 ZNF623O75123 536 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 KRT18P05783 430 aaKnown RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 ESRRAP11474 423 aaPredicted RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 PROZP22891 400 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 MAN1A1P33908 653 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 NOTUMQ6P988 496 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 SLC2A7Q6PXP3 512 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 DHDDSQ86SQ9 333 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 SRRM1Q8IYB3 904 aaKnown RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 LPPQ93052 612 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 C18orf8Q96DM3 657 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 RAD9AQ99638 391 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 HAPLN2Q9GZV7 340 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 ST6GALNAC4Q9H4F1 302 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 Q9H521 79 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 UBAP1Q9NZ09 502 aa13.52□□□□□ -0.25
DDX56-206ENST00000446987 FAF1Q9UNN5 650 aaPredicted RBP13.52□□□□□ -0.25
DDX56-206ENST00000446987 TDRD15B5MCY1 1934 aaKnown RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 PPARGP37231 505 aaPredicted RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 GTF2BQ00403 316 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 CDK16Q00536 496 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 TAP1Q03518 808 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 KCNA1Q09470 495 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 ZBTB17Q13105 803 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 RWDD4Q6NW29 188 aaKnown RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 MRPL10Q7Z7H8 261 aaKnown RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 SLC30A5Q8TAD4 765 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 EFHD2Q96C19 240 aaPredicted RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 TIFAQ96CG3 184 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 ACO2Q99798 780 aaKnown RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 TARS2Q9BW92 718 aaKnown RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 C1orf21Q9H246 121 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 ZHX3Q9H4I2 956 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 HES2Q9Y543 173 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 IPPQ9Y573 584 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 PCDHB2Q9Y5E7 798 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 GPC6Q9Y625 555 aaPredicted RBP13.51□□□□□ -0.25
DDX56-206ENST00000446987 ANK1P16157 1881 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 PLXNA4Q9HCM2 1894 aa13.51□□□□□ -0.25
DDX56-206ENST00000446987 RASA4BC9J798 803 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 K7ERI5 159 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 MAGEB3O15480 346 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 RASA4O43374 803 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 ACSL3O95573 720 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 PIGRP01833 764 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 CD48P09326 243 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 GSTT2P0CG29 244 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 GSTT2BP0CG30 244 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 PTPN2P17706 415 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 AMPD1P23109 780 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 CETN2P41208 172 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 AFF1P51825 1210 aaKnown RBP13.5□□□□□ -0.25
DDX56-206ENST00000446987 RAB30Q15771 203 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 TBCCQ15814 346 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 NDUFA5Q16718 116 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 SLC27A1Q6PCB7 646 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 ZNF720Q7Z2F6 126 aa13.5□□□□□ -0.25
DDX56-206ENST00000446987 MAP4K3Q8IVH8 894 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms