RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 BROXQ5VW32 411 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ARL6IP4Q66PJ3 421 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MFSD5Q6N075 450 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TIGD7Q6NT04 549 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TMEM53Q6P2H8 277 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MTFR2Q6P444 385 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NOTUMQ6P988 496 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PSRC1Q6PGN9 363 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 BLOC1S2Q6QNY1 142 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SLC22A25Q6T423 547 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KLHL17Q6TDP4 642 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SEZ6L2Q6UXD5 910 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MACC1Q6ZN28 852 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MARK2Q7KZI7 788 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ARHGAP22Q7Z5H3 698 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 AKAP14Q86UN6 197 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 FAM83AQ86UY5 434 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 VASH2Q86V25 355 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TPRA1Q86W33 373 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF227Q86WZ6 799 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 APLFQ8IW19 511 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MFN1Q8IWA4 741 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SULF2Q8IWU5 870 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SYCP3Q8IZU3 236 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SLC43A2Q8N370 569 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KDM8Q8N371 416 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MPP5Q8N3R9 675 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 LIX1Q8N485 282 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 POU5F2Q8N7G0 328 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RNF152Q8N8N0 203 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ATAD1Q8NBU5 361 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CHST14Q8NCH0 376 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RCBTB1Q8NDN9 531 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 BHLHE23Q8NDY6 225 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CFAP61Q8NHU2 1237 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CYP2W1Q8TAV3 490 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MYCBPAPQ8TBZ2 947 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DCAF11Q8TEB1 546 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CCDC12Q8WUD4 166 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 AFG1LQ8WV93 481 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 LMBR1Q8WVP7 490 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PRPF31Q8WWY3 499 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RAPGEF4Q8WZA2 1011 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RILPL2Q969X0 211 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RHBDF1Q96CC6 855 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 HDAC11Q96DB2 347 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SHISA4Q96DD7 197 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 IQCDQ96DY2 449 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TMA16Q96EY4 203 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NEIL1Q96FI4 390 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PGM2Q96G03 612 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CCDC140Q96MF4 163 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NECAB3Q96P71 396 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TWNKQ96RR1 684 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KCNK17Q96T54 332 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CDRT15Q96T59 188 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MMS19Q96T76 1030 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CYTH2Q99418 400 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CGRRF1Q99675 332 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MIPEPQ99797 713 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PRRX2Q99811 253 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 LLPHQ9BRT6 129 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TPPP3Q9BW30 176 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PKIBQ9C010 78 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TINAGL1Q9GZM7 467 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 AP5M1Q9H0R1 490 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 HDHD2Q9H0R4 259 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NDST4Q9H3R1 872 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 OPA3Q9H6K4 179 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TDRD3Q9H7E2 651 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 C14orf93Q9H972 538 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 POLR1BQ9H9Y6 1135 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 BRF2Q9HAW0 419 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 C12orf10Q9HB07 376 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 IL21RQ9HBE5 538 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PCDH9Q9HC56 1237 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TUFT1Q9NNX1 390 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 NECTIN3Q9NQS3 549 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MBNL1Q9NR56 388 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GIMAP4Q9NUV9 329 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TBC1D13Q9NVG8 400 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 DNAJC28Q9NX36 388 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 WBP1LQ9NX94 342 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ARHGEF38Q9NXL2 777 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TMOD3Q9NYL9 352 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 PLA2G3Q9NZ20 509 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KLK14Q9P0G3 267 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 C5AR2Q9P296 337 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KLHL14Q9P2G3 628 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MYO1AQ9UBC5 1043 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 TUBGCP4Q9UGJ1 667 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 CNOT11Q9UKZ1 510 aaKnown RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 ZNF214Q9UL59 606 aaPredicted RBP2.89□□□□□ -1.95
UBBP3-201ENST00000445497 KIAA1257Q9ULG3 409 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 MYO6Q9UM54 1294 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 STX8Q9UNK0 236 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 RWDD3Q9Y3V2 267 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 SNX14Q9Y5W7 946 aa2.89□□□□□ -1.95
UBBP3-201ENST00000445497 GPC6Q9Y625 555 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms