RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
LINC02549-201ENST00000445346 TMX3Q96JJ7 454 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 XPO6Q96QU8 1125 aaKnown RBP8.41□□□□□ -1.06
LINC02549-201ENST00000445346 MRPL45Q9BRJ2 306 aaKnown RBP8.41□□□□□ -1.06
LINC02549-201ENST00000445346 MED10Q9BTT4 135 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 ELOVL4Q9GZR5 314 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 SPHK2Q9NRA0 654 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 OLFML3Q9NRN5 406 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 PANK4Q9NVE7 773 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 DNAJC17Q9NVM6 304 aaKnown RBP8.41□□□□□ -1.06
LINC02549-201ENST00000445346 STIM2Q9P246 746 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 SUSD2Q9UGT4 822 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
LINC02549-201ENST00000445346 APOBEC2Q9Y235 224 aaKnown RBP8.41□□□□□ -1.06
LINC02549-201ENST00000445346 MYO16Q9Y6X6 1858 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ATP8B3O60423 1300 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 NEDD8-MDP1E9PL57 170 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 M0R082 166 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 CLDN5O00501 218 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 HOXC11O43248 304 aaPredicted RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 COCHO43405 550 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 TACC1O75410 805 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 FTH1P19P0C7X4 201 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 DLATP10515 647 aaKnown RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 BRD2P25440 801 aaKnown RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 STAT6P42226 847 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ZNF211Q13398 564 aaPredicted RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 TRPC3Q13507 836 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 COL28A1Q2UY09 1125 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 WDR72Q3MJ13 1102 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 WDR45BQ5MNZ6 344 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 EGFLAMQ63HQ2 1017 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 GRAMD4Q6IC98 578 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 KIAA1324Q6UXG2 1013 aaKnown RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 CCDC73Q6ZRK6 1079 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 TPGS1Q6ZTW0 290 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 USP49Q70CQ1 688 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 TRAPPC11Q7Z392 1133 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 LIMS2Q7Z4I7 341 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 PDZD3Q86UT5 571 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 TMEM25Q86YD3 366 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 WDR49Q8IV35 697 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 SLC41A1Q8IVJ1 513 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 NAXDQ8IW45 347 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 CCDC65Q8IXS2 484 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 B3GALNT2Q8NCR0 500 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ZNF417Q8TAU3 575 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 SETD7Q8WTS6 366 aaKnown RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 HNRNPLLQ8WVV9 542 aaKnown RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ADAMTS14Q8WXS8 1223 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 OVCA2Q8WZ82 227 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 DNAJC19Q96DA6 116 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ZNF587Q96SQ5 575 aaPredicted RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 KIF2CQ99661 725 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ZNF518BQ9C0D4 1074 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 MIR1-1HGQ9H1L0 117 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 DPEP3Q9H4B8 488 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 KIAA1586Q9HCI6 787 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
LINC02549-201ENST00000445346 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.06
LINC02549-201ENST00000445346 SPEGQ15772 3267 aa8.4□□□□□ -1.07
LINC02549-201ENST00000445346 PI4KAP42356 2102 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 ANAPC1Q9H1A4 1944 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 PTPRJQ12913 1337 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 KIAA1549LQ6ZVL6 1849 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 A0A1W2PQF6 199 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 MEI4A8MW99 385 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 TRIM24O15164 1050 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 MMP20O60882 483 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 PHACTR2O75167 634 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CST3P01034 146 aaPredicted RBP8.39□□□□□ -1.07
LINC02549-201ENST00000445346 FAM163BP0C2L3 166 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 MAOBP27338 520 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 SERPINB4P48594 390 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 SLC5A3P53794 718 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CACNA2D1P54289 1103 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 GOLGA8FQ08AF8 430 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 GOLGA8DPQ0D2H9 430 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 RABEP1Q15276 862 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CCNI2Q6ZMN8 369 aaPredicted RBP8.39□□□□□ -1.07
LINC02549-201ENST00000445346 MIB1Q86YT6 1006 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CBWD2Q8IUF1 395 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 SCAMP5Q8TAC9 235 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 ZNF419Q96HQ0 510 aaPredicted RBP8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CLIC6Q96NY7 704 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 KCNK16Q96T55 309 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 ACOX2Q99424 681 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 BBS2Q9BXC9 721 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 B3GNT5Q9BYG0 378 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 ZDHHC5Q9C0B5 715 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC02549-201ENST00000445346 HSPBP1Q9NZL4 362 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 WDR35Q9P2L0 1181 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 RAD54BQ9Y620 910 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 CLIC4Q9Y696 253 aa8.39□□□□□ -1.07
LINC02549-201ENST00000445346 ZZEF1O43149 2961 aa8.38□□□□□ -1.07
LINC02549-201ENST00000445346 A0A1B0GTW7 788 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms