RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMARCAL1-209ENST00000444508 PLK2Q9NYY3 685 aa18.14■□□□□ 0.49
SMARCAL1-209ENST00000444508 KIAA1549LQ6ZVL6 1849 aa18.14■□□□□ 0.49
SMARCAL1-209ENST00000444508 WDFY4Q6ZS81 3184 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 M0QYT0 321 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TSPAN3O60637 253 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ATG13O75143 517 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 GYPCP04921 128 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TPM1P09493 284 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ABCB4P21439 1286 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 CCR1P32246 355 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 SULT1E1P49888 294 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 CCR3P51677 355 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 C1QBPQ07021 282 aaKnown RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TCF15Q12870 199 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 NME3Q13232 169 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 PPP2R5DQ14738 602 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TDRD12Q587J7 1177 aaKnown RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 FYB2Q5VWT5 728 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ACAD10Q6JQN1 1059 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 MAMSTRQ6ZN01 415 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 SND1Q7KZF4 910 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ARCQ7LC44 396 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ZNF571Q7Z3V5 609 aaPredicted RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 ATP6V0D2Q8N8Y2 350 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 SYT11Q9BT88 431 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 IRX2Q9BZI1 471 aaPredicted RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 METTL5Q9NRN9 209 aaKnown RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TMEM51Q9NW97 253 aa18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 BZW2Q9Y6E2 419 aaKnown RBP18.13■□□□□ 0.49
SMARCAL1-209ENST00000444508 TYW5A2RUC4 315 aaKnown RBP18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 TBC1D3BA6NDS4 549 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 H0Y858 1186 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 SKILP12757 684 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 CASP14P31944 242 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 CXCL12P48061 93 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 DGKGP49619 791 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 SEC13P55735 322 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 PTP4A2Q12974 167 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 MTA1Q13330 715 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 SLC25A52Q3SY17 297 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 MON1BQ7L1V2 547 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 PHLDB2Q86SQ0 1253 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 VPS36Q86VN1 386 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 VSTM4Q8IW00 320 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 EZH1Q92800 747 aaPredicted RBP18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 TMA16Q96EY4 203 aaKnown RBP18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 BTN2A3PQ96KV6 586 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 NPY6RQ99463 290 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 TMEM59LQ9UK28 342 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 FBXO4Q9UKT5 387 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 PAXBP1Q9Y5B6 917 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 CACNA1IQ9P0X4 2223 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 CACNA1HO95180 2353 aa18.12■□□□□ 0.49
SMARCAL1-209ENST00000444508 A0A0A0MRY4 1105 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 GOLGA6L7A0A1B0GV03 622 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 TMCO5BA8MYB1 307 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 K7EQS6 105 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 F9P00740 461 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 SERPING1P05155 500 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 KRT3P12035 628 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 FLT3P36888 993 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 TNFRSF4P43489 277 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 GSCP56915 257 aaPredicted RBP18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 CSTF1Q05048 431 aaKnown RBP18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 DEUP1Q05D60 604 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 EIF4EBP2Q13542 120 aaPredicted RBP18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 GAS6Q14393 721 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 FAM133BQ5BKY9 247 aaKnown RBP18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 C10orf76Q5T2E6 689 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 RFWD3Q6PCD5 774 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 PHTF2Q8N3S3 785 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 TERB1Q8NA31 727 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 C3orf20Q8ND61 904 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 RPLP0P6Q8NHW5 317 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 ACDQ96AP0 544 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 TRIM5Q9C035 493 aa18.11■□□□□ 0.49
SMARCAL1-209ENST00000444508 ANKRD62A6NC57 917 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 KCNU1A8MYU2 1149 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 CHURC1-FNTBB4DL54 471 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 SDC4P31431 198 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 SLC6A4P31645 630 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 MESP2Q0VG99 397 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 C2orf27AQ580R0 203 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 PIK3R6Q5UE93 754 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 NADSYN1Q6IA69 706 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 DNAJC24Q6P3W2 148 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 CHSY1Q86X52 802 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 MCOLN2Q8IZK6 566 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 EMC1Q8N766 993 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 HJURPQ8NCD3 748 aaPredicted RBP18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 ATOH1Q92858 354 aaPredicted RBP18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 NT5C3BQ969T7 300 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 PGAP3Q96FM1 320 aaPredicted RBP18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 VCPIP1Q96JH7 1222 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 CFAP57Q96MR6 1250 aa18.1■□□□□ 0.49
SMARCAL1-209ENST00000444508 TBCBQ99426 244 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms