RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 ADRA1BP35368 520 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 SLC11A2P49281 568 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 AIF1P55008 147 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 HTR4Q13639 388 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 PARM1Q6UWI2 310 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 DENND1CQ8IV53 801 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 MFSD6LQ8IWD5 586 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 SYCE1Q8N0S2 351 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 WBP2Q969T9 261 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 NTAN1Q96AB6 310 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 BTN2A3PQ96KV6 586 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 TKTL2Q9H0I9 626 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 TBC1D14Q9P2M4 693 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 USP18Q9UMW8 372 aa16.38■□□□□ 0.21
USP40-206ENST00000443711 GRID2IPA4D2P6 1211 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 LOC730098B7Z3J9 87 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 SLC9A3R1O14745 358 aaPredicted RBP16.37■□□□□ 0.21
USP40-206ENST00000443711 SPOPO43791 374 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 ACSL4O60488 711 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 GREM1O60565 184 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 PALMO75781 387 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 MOCS2O96007 188 aaPredicted RBP16.37■□□□□ 0.21
USP40-206ENST00000443711 KLKB1P03952 638 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 COMTP21964 271 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 ACBD5Q5T8D3 534 aaPredicted RBP16.37■□□□□ 0.21
USP40-206ENST00000443711 VITQ6UXI7 678 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 Q6ZNB5 142 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 SLFN11Q7Z7L1 901 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 ADHFE1Q8IWW8 467 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 YAF2Q8IY57 180 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 LRRC57Q8N9N7 239 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 DEPDC1BQ8WUY9 529 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 FGF14Q92915 247 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 LRRC3BQ96PB8 259 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 HAPLN3Q96S86 360 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 DDX50Q9BQ39 737 aaKnown RBP16.37■□□□□ 0.21
USP40-206ENST00000443711 KXD1Q9BQD3 176 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 IGSF9Q9P2J2 1179 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 AGO1Q9UL18 857 aaKnown RBP16.37■□□□□ 0.21
USP40-206ENST00000443711 ZKSCAN5Q9Y2L8 839 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 MYO10Q9HD67 2058 aa16.37■□□□□ 0.21
USP40-206ENST00000443711 PAGE1O75459 146 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 PSMC3P17980 439 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 SCAPQ12770 1279 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 EFHC2Q5JST6 749 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 ADGRF1Q5T601 910 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 ERMARDQ5T6L9 678 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 DAB2IPQ5VWQ8 1189 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 CPNE8Q86YQ8 564 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 PSTKQ8IV42 348 aaKnown RBP16.36■□□□□ 0.21
USP40-206ENST00000443711 CCDC185Q8N715 623 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
USP40-206ENST00000443711 RIN3Q8TB24 985 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 UBE2Q2Q8WVN8 375 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 ASB2Q96Q27 587 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 ALS2CR12Q96Q35 445 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 PLA2G2FQ9BZM2 168 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 STOML2Q9UJZ1 356 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 FZD10Q9ULW2 581 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 CAPN6Q9Y6Q1 641 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 NUMBLQ9Y6R0 609 aa16.36■□□□□ 0.21
USP40-206ENST00000443711 USP27XA6NNY8 438 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 KRT7P08729 469 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 CHKAP35790 457 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 IFNAR2P48551 515 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 MLLT6P55198 1093 aaPredicted RBP16.35■□□□□ 0.21
USP40-206ENST00000443711 FCHO2Q0JRZ9 810 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 LRRC38Q5VT99 294 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 PEX26Q7Z412 305 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 BBS7Q8IWZ6 715 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 TRIM58Q8NG06 486 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 TEKT4Q8WW24 435 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 C1orf74Q96LT6 269 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 PEBP4Q96S96 227 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 RPP25Q9BUL9 199 aaKnown RBP16.35■□□□□ 0.21
USP40-206ENST00000443711 TRMT61BQ9BVS5 477 aaKnown RBP16.35■□□□□ 0.21
USP40-206ENST00000443711 OSBPL2Q9H1P3 480 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 GOLPH3Q9H4A6 298 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 ZWILCHQ9H900 591 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 TMPRSS4Q9NRS4 437 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 DUS2Q9NX74 493 aaKnown RBP16.35■□□□□ 0.21
USP40-206ENST00000443711 AMFRQ9UKV5 643 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 HYOU1Q9Y4L1 999 aa16.35■□□□□ 0.21
USP40-206ENST00000443711 KIF26AQ9ULI4 1882 aaPredicted RBP16.34■□□□□ 0.21
USP40-206ENST00000443711 SCAMP3O14828 347 aaKnown RBP16.34■□□□□ 0.21
USP40-206ENST00000443711 CHADO15335 359 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 KIF5CO60282 957 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 BMP1P13497 986 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 TCF4P15884 667 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 IL1R2P27930 398 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
USP40-206ENST00000443711 TAS2R40P59535 323 aa16.34■□□□□ 0.21
USP40-206ENST00000443711 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
USP40-206ENST00000443711 ZP2Q05996 745 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms