RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 TULP3O75386 442 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 FAM228BP0C875 321 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 TDGF1P13385 188 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 RRM1P23921 792 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 HOXD9P28356 352 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 NOS2P35228 1153 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 GGCXP38435 758 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 C15orf59Q2T9L4 293 aaPredicted RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 PIK3R6Q5UE93 754 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 RFWD3Q6PCD5 774 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 ARCQ7LC44 396 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 SUGP1Q8IWZ8 645 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 ZNF683Q8IZ20 524 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 NAT16Q8N8M0 369 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 DTWD2Q8NBA8 298 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 CD101Q93033 1021 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 BHMTQ93088 406 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 CFAP57Q96MR6 1250 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 P2RY13Q9BPV8 354 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 MAGEB5Q9BZ81 275 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 LMAN1LQ9HAT1 526 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 LSM7Q9UK45 103 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
PDLIM2-212ENST00000443561 CKAP5Q14008 2032 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 NEDD8-MDP1E9PL57 170 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ACSL4O60488 711 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TSPAN3O60637 253 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ENDOD1O94919 500 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ADCY5O95622 1261 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 LATS1O95835 1130 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TYRP14679 529 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 RFC1P35251 1148 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 EIF2DP41214 584 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 NSFP46459 744 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 RPS9P46781 194 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ADKP55263 362 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 RPL7AP62424 266 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 KDSRQ06136 332 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 CCDC14Q49A88 953 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 TC2NQ8N9U0 490 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 C3orf20Q8ND61 904 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 RXFP2Q8WXD0 754 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 PGAP3Q96FM1 320 aaPredicted RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 CHP1Q99653 195 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 BBS2Q9BXC9 721 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 DCLK3Q9C098 648 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ISCUQ9H1K1 167 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 ZDHHC4Q9NPG8 344 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 DDIT4Q9NX09 232 aa13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 LUC7L2Q9Y383 392 aaKnown RBP13.35□□□□□ -0.27
PDLIM2-212ENST00000443561 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 A0A0A0MRY4 1105 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 PRRT4C9JH25 899 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 M0QYT0 321 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 CAPN9O14815 690 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 MOCS2O96007 188 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 ADH1CP00326 375 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 SERPING1P05155 500 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 HNRNPLP14866 589 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 KIR2DL1P43626 348 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 CXCR3P49682 368 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 SULT1E1P49888 294 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 RPS24P62847 133 aaKnown RBP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 CDK17Q00537 523 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 GAD2Q05329 585 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 MTAPQ13126 283 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 ANO4Q32M45 955 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 SLC25A52Q3SY17 297 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 MS4A13Q5J8X5 152 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 EMC10Q5UCC4 262 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 TMEM215Q68D42 235 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 PLEKHA7Q6IQ23 1121 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 C14orf80Q86SX3 495 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 ARFGAP1Q8N6T3 406 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 CENPIQ92674 756 aaPredicted RBP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 GOLGA1Q92805 767 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 AZIN2Q96A70 460 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 IQCDQ96DY2 449 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 FAM204AQ9H8W3 233 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 ABHD10Q9NUJ1 306 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 ARHGEF38Q9NXL2 777 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 NEU3Q9UQ49 428 aa13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDLIM2-212ENST00000443561 SIGLEC16A6NMB1 481 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 STK25O00506 426 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 CCP110O43303 1012 aa13.33□□□□□ -0.28
PDLIM2-212ENST00000443561 RNF40O75150 1001 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms