RNA–Protein interactions for RNA: ENST00000443289.5

ATG4C-205, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 2

Gene ATG4C, Length 603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-205ENST00000443289 HMGB4Q8WW32 186 aa17.01■□□□□ 0.31
ATG4C-205ENST00000443289 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
ATG4C-205ENST00000443289 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
ATG4C-205ENST00000443289 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
ATG4C-205ENST00000443289 FHOD1Q9Y613 1164 aa17.01■□□□□ 0.31
ATG4C-205ENST00000443289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 PIK3R2O00459 728 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 TEX33O43247 280 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 HOXB2P14652 356 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 MPLP40238 635 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 P2RY2P41231 377 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 RPL34P49207 117 aaKnown RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 RAPGEF1Q13905 1077 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 PMS2CLQ68D20 193 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 C12orf50Q8NA57 414 aaPredicted RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 DDI1Q8WTU0 396 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 STK32AQ8WU08 396 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 UCMAQ8WVF2 138 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 ZNF606Q8WXB4 792 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 P2RY11Q96G91 374 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 SPACA7Q96KW9 195 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 NAP1L5Q96NT1 182 aaPredicted RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 GABRG3Q99928 467 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 SLC2A11Q9BYW1 496 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 STOML2Q9UJZ1 356 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 EML5Q05BV3 1969 aa17■□□□□ 0.31
ATG4C-205ENST00000443289 MYO18AQ92614 2054 aaKnown RBP17■□□□□ 0.31
ATG4C-205ENST00000443289 A0A1W2PQF6 199 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 BCLAF3A2AJT9 711 aaKnown RBP16.99■□□□□ 0.31
ATG4C-205ENST00000443289 LRRC10BA6NIK2 292 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 SLC30A4O14863 429 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 NPC1O15118 1278 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 EPHB6O15197 1021 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 MAP3K13O43283 966 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 GNA15P30679 374 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 WASP42768 502 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 FANCCQ00597 558 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 CREB5Q02930 508 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 CCDC6Q16204 474 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 AASDHQ4L235 1098 aaPredicted RBP16.99■□□□□ 0.31
ATG4C-205ENST00000443289 MPPE1Q53F39 396 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 ADGRF1Q5T601 910 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 KLHDC7AQ5VTJ3 777 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 UNC45BQ8IWX7 931 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 ACOX2Q99424 681 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 MIS12Q9H081 205 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 ST7Q9NRC1 585 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 SIK3Q9Y2K2 1263 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 DCHS1Q96JQ0 3298 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 RALGAPA1Q6GYQ0 2036 aa16.99■□□□□ 0.31
ATG4C-205ENST00000443289 THAP12O43422 761 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 GDF9O60383 454 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 BCKDHBP21953 392 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 SF3A2Q15428 464 aaKnown RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 SPDYCQ5MJ68 293 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 NUGGCQ68CJ6 796 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 DENND1BQ6P3S1 775 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 ANKS1BQ7Z6G8 1248 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 IPO4Q8TEX9 1081 aaKnown RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 CLEC4CQ8WTT0 213 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 RLN3Q8WXF3 142 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 TMA16Q96EY4 203 aaKnown RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 PIWIL1Q96J94 861 aaKnown RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 SLC4A5Q9BY07 1137 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 IRX2Q9BZI1 471 aaPredicted RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 GANQ9H2C0 597 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 RTN4Q9NQC3 1192 aaKnown RBP16.98■□□□□ 0.31
ATG4C-205ENST00000443289 CACNA1AO00555 2505 aa16.98■□□□□ 0.31
ATG4C-205ENST00000443289 MSI1O43347 362 aaKnown RBP16.97■□□□□ 0.31
ATG4C-205ENST00000443289 TIMM44O43615 452 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 IGLV3-27P01718 113 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 NCAM1P13591 858 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 UCHL3P15374 230 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 GABRG2P18507 467 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 SLC11A2P49281 568 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 LIMK1P53667 647 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 TBX4P57082 545 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 POLR2FP61218 127 aaKnown RBP16.97■□□□□ 0.31
ATG4C-205ENST00000443289 RING1Q06587 406 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 EIF4HQ15056 248 aaKnown RBP16.97■□□□□ 0.31
ATG4C-205ENST00000443289 GEN1Q17RS7 908 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 MAP7D1Q3KQU3 841 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 BEND5Q7L4P6 421 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 TMEM110Q86TL2 294 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 SCUBE3Q8IX30 993 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 SHC3Q92529 594 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 AZIN2Q96A70 460 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 FAM149B1Q96BN6 582 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 NLRC4Q9NPP4 1024 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 ELOVL2Q9NXB9 296 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 CACNA2D2Q9NY47 1150 aa16.97■□□□□ 0.31
ATG4C-205ENST00000443289 THAP10Q9P2Z0 257 aaPredicted RBP16.97■□□□□ 0.31
ATG4C-205ENST00000443289 A0A1B0GTH6 734 aa16.96■□□□□ 0.31
ATG4C-205ENST00000443289 TSPAN3O60637 253 aa16.96■□□□□ 0.31
ATG4C-205ENST00000443289 ZNF217O75362 1048 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms