RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 TIMM44O43615 452 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
TNXB-202ENST00000442721 EPHX1P07099 455 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 HMBSP08397 361 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 ATXN1LP0C7T5 689 aaKnown RBP12.46□□□□□ -0.41
TNXB-202ENST00000442721 ACADMP11310 421 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 CD58P19256 250 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 VAMP7P51809 220 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.41
TNXB-202ENST00000442721 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.41
TNXB-202ENST00000442721 ENPEPQ07075 957 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 PPP3CAQ08209 521 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 RAB41Q5JT25 222 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 CEP135Q66GS9 1140 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 DENND1CQ8IV53 801 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 HSCBQ8IWL3 235 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 PAGE5Q96GU1 130 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 UBXN6Q9BZV1 441 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 IMPG2Q9BZV3 1241 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 CIPCQ9C0C6 399 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 SERTAD1Q9UHV2 236 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 BTBD3Q9Y2F9 522 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 FRMD4BQ9Y2L6 1034 aa12.46□□□□□ -0.41
TNXB-202ENST00000442721 KNTC1P50748 2209 aa12.46□□□□□ -0.42
TNXB-202ENST00000442721 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CYBBP04839 570 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 PDIA4P13667 645 aaKnown RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 HLA-EP13747 358 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 HOXD9P28356 352 aaPredicted RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 ACSL1P33121 698 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 GCLMP48507 274 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CSNK1EP49674 416 aaKnown RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 PDE4CQ08493 712 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 TRIP4Q15650 581 aaPredicted RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 NFIL3Q16649 462 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 KIF19Q2TAC6 998 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 SERPINA13PQ6UXR4 307 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 BHLHA9Q7RTU4 235 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CEP57L1Q8IYX8 460 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 HNRNPLLQ8WVV9 542 aaKnown RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 PLD4Q96BZ4 506 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 LHX5Q9H2C1 402 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 C6orf106Q9H6K1 298 aaPredicted RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 STOML2Q9UJZ1 356 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 STRIP2Q9ULQ0 834 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.45□□□□□ -0.42
TNXB-202ENST00000442721 SNX11Q9Y5W9 270 aa12.45□□□□□ -0.42
TNXB-202ENST00000442721 CALUO43852 315 aaPredicted RBP12.44□□□□□ -0.42
TNXB-202ENST00000442721 KIF20AO95235 890 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 HLA-FP30511 346 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 GRIA4P48058 902 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 ME1P48163 572 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 YWHAGP61981 247 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNXB-202ENST00000442721 GSE1Q14687 1217 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
TNXB-202ENST00000442721 PTPRNQ16849 979 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 ARHGAP17Q68EM7 881 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 INTS8Q75QN2 995 aaKnown RBP12.44□□□□□ -0.42
TNXB-202ENST00000442721 KIAA0907Q7Z7F0 614 aaPredicted RBP12.44□□□□□ -0.42
TNXB-202ENST00000442721 FAM124AQ86V42 546 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 PIGZQ86VD9 579 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 MARCH9Q86YJ5 346 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 GALNT15Q8N3T1 639 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNXB-202ENST00000442721 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 RHBDD1Q8TEB9 315 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 WFIKKN2Q8TEU8 576 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 FAXDC2Q96IV6 333 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 FBRSQ9HAH7 460 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 TMEM8AQ9HCN3 771 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 TM9SF3Q9HD45 589 aa12.44□□□□□ -0.42
TNXB-202ENST00000442721 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.44□□□□□ -0.42
TNXB-202ENST00000442721 A0A087WV48 116 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 TRABD2BA6NFA1 517 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 PAPSS1O43252 624 aaPredicted RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 TNFSF14O43557 240 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 TSPAN3O60637 253 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 MYL1P05976 194 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 ZSCAN22P10073 491 aaPredicted RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 NR2F2P24468 414 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 GRK6P43250 576 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 RAD23BP54727 409 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 ZBTB16Q05516 673 aa12.43□□□□□ -0.42
TNXB-202ENST00000442721 SMAD1Q15797 465 aaKnown RBP12.43□□□□□ -0.42
TNXB-202ENST00000442721 MPPE1Q53F39 396 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms