RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 BTN2A3PQ96KV6 586 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 C11orf70Q9BRQ4 267 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 FAM204AQ9H8W3 233 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 FBRSL1Q9HCM7 1045 aaKnown RBP15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 DDIT4Q9NX09 232 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 DEC1Q9P2X7 70 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC12A6Q9UHW9 1150 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 FBXO10Q9UK96 956 aa15.63■□□□□ 0.09
CSNK1E-210ENST00000442216 CHURC1-FNTBB4DL54 471 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 GOLGA8SH3BPF8 625 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 ATG13O75143 517 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 KAT7O95251 611 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 SERPING1P05155 500 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 HNRNPH3P31942 346 aaKnown RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 CASP14P31944 242 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 CCR1P32246 355 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 TNFRSF4P43489 277 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC6A11P48066 632 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 CCR3P51677 355 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 PTPN5P54829 565 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 PITX1P78337 314 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 MTAPQ13126 283 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 C2CD6Q53TS8 623 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 MPP7Q5T2T1 576 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 HGSNATQ68CP4 663 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 NAIF1Q69YI7 327 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 ZNF571Q7Z3V5 609 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 DRC7Q8IY82 874 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 C3orf20Q8ND61 904 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 PRSS33Q8NF86 280 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 CPLX3Q8WVH0 158 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC2A11Q9BYW1 496 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 ARHGEF4Q9NR80 690 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 RBM12Q9NTZ6 932 aaKnown RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 SPATA6Q9NWH7 488 aaPredicted RBP15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 FBXO4Q9UKT5 387 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 PAXBP1Q9Y5B6 917 aa15.62■□□□□ 0.09
CSNK1E-210ENST00000442216 KCNU1A8MYU2 1149 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 K7EQS6 105 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 M0QYT0 321 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 LAMTOR5O43504 91 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 PAPSS2O95340 614 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 TPM1P09493 284 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ABCB4P21439 1286 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 FLT3P36888 993 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 TCF15Q12870 199 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ARID5BQ14865 1188 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ANGPT1Q15389 498 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 HSF5Q4G112 596 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 FAM133BQ5BKY9 247 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ZC3H12AQ5D1E8 599 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ACBD5Q5T8D3 534 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 PIK3R6Q5UE93 754 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 GRAMD4Q6IC98 578 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 SND1Q7KZF4 910 aaKnown RBP eCLIP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 BNIPLQ7Z465 357 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 VPS36Q86VN1 386 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 MCOLN2Q8IZK6 566 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 NAT16Q8N8M0 369 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 ZNF557Q8N988 423 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 TERB1Q8NA31 727 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 KCNV2Q8TDN2 545 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 DDI1Q8WTU0 396 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 EZH1Q92800 747 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 TMA16Q96EY4 203 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 PRMT8Q9NR22 394 aaPredicted RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 METTL5Q9NRN9 209 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 DNAJC17Q9NVM6 304 aaKnown RBP15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 SLC27A6Q9Y2P4 619 aa15.61■□□□□ 0.09
CSNK1E-210ENST00000442216 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 TCRBV5S1A1TA0A578 114 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 SIGLEC16A6NMB1 481 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 RNF40O75150 1001 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 RTN2O75298 545 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 ENDOD1O94919 500 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 CISD3P0C7P0 127 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 KRT3P12035 628 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 SKILP12757 684 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 DGKGP49619 791 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 CXCR3P49682 368 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 SULT1E1P49888 294 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 MRPS21P82921 87 aaKnown RBP15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 GAS6Q14393 721 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 ZNF528Q3MIS6 628 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 TDRD12Q587J7 1177 aaKnown RBP15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 OTUD1Q5VV17 481 aaPredicted RBP15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 RNF43Q68DV7 783 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 OR8K1Q8NGG5 319 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 SELENOOQ9BVL4 669 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 TRIM5Q9C035 493 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 RBSNQ9H1K0 784 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 PLK2Q9NYY3 685 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 STARD13Q9Y3M8 1113 aa15.6■□□□□ 0.09
CSNK1E-210ENST00000442216 TYW5A2RUC4 315 aaKnown RBP15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 TBC1D3BA6NDS4 549 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 C2CD4BA6NLJ0 364 aa15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.09
CSNK1E-210ENST00000442216 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms