RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CNOT10Q9H9A5 744 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 MARCH5Q9NX47 278 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SCN10AQ9Y5Y9 1956 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ADAM12O43184 909 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TBX10O75333 385 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CST3P01034 146 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 PIGRP01833 764 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 FTLP02792 175 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CHN1P15882 459 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CD72P21854 359 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 DNAJB1P25685 340 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 LRPAP1P30533 357 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 VIPR2P41587 438 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 WNT7BP56706 349 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 COG7P83436 770 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 IFT88Q13099 833 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC47A2Q86VL8 602 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ERICH1Q86X53 443 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC13A5Q86YT5 568 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 RGL4Q8IZJ4 473 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 C2orf15Q8WU43 125 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 P3H4Q92791 437 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CABS1Q96KC9 395 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 LPIN3Q9BQK8 851 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 MRPL45Q9BRJ2 306 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TRIM62Q9BVG3 475 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TASP1Q9H6P5 420 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 KLC4Q9NSK0 619 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 DUS2Q9NX74 493 aaKnown RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 LGALS13Q9UHV8 139 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CNTN6Q9UQ52 1028 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 NFATC1O95644 943 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CREB1P16220 341 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 PSMC3P17980 439 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ABCB4P21439 1286 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CETN2P41208 172 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CBLBQ13191 982 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 NME3Q13232 169 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 CUL2Q13617 745 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF852Q6ZMS4 543 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 HS6ST3Q8IZP7 471 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SPOCK2Q92563 424 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SMARCD2Q92925 531 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 E2F7Q96AV8 911 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 TMEM176AQ96HP8 235 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 SPON2Q9BUD6 331 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 DPH5Q9H2P9 285 aa7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 ACTR5Q9H9F9 607 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 FARP1Q9Y4F1 1045 aaPredicted RBP7.66□□□□□ -1.18
CDC42BPA-208ENST00000442054 GJB6O95452 261 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 AGTP01019 485 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 MMEP08473 750 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 NCAM1P13591 858 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CHKAP35790 457 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 TKTL1P51854 596 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 GPC5P78333 572 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 KIAA0319Q5VV43 1072 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 PHLDB2Q86SQ0 1253 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CACUL1Q86Y37 369 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF276Q8N554 614 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ARFGAP2Q8N6H7 521 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 NAT16Q8N8M0 369 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 EPS8L3Q8TE67 593 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF516Q92618 1163 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CHMP6Q96FZ7 201 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF518BQ9C0D4 1074 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CD248Q9HCU0 757 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 PPANQ9NQ55 473 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CFAP97Q9P2B7 532 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 STAP1Q9ULZ2 295 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 PLA2G4CQ9UP65 541 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 UTP11Q9Y3A2 253 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 KNL1Q8NG31 2342 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM170BA6NMN3 283 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 HEPACAM2A8MVW5 462 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAN2B1O00754 1011 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 TLR5O60602 858 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CYP1A1P04798 512 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 GSTA1P08263 222 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 FGFR3P22607 806 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC11A2P49281 568 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ELF3P78545 371 aaPredicted RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 RIPK1Q13546 671 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 SCARA3Q6AZY7 606 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CYB5D1Q6P9G0 228 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ENOSF1Q7L5Y1 443 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 UNC93AQ86WB7 457 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 UBALD2Q8IYN6 164 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CHPFQ8IZ52 775 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 NELL2Q99435 816 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 HAPLN2Q9GZV7 340 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 RAB17Q9H0T7 212 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 KCNK12Q9HB15 430 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 WDR6Q9NNW5 1121 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 TDP1Q9NUW8 608 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZMYM5Q9UJ78 669 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 TPX2Q9ULW0 747 aaKnown RBP7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATP8A1Q9Y2Q0 1164 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 CACNA1HO95180 2353 aa7.65□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM47DPA6NHR8 397 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms