RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PSMC3IPQ9P2W1 217 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-206ENST00000441580 PCDHB5Q9Y5E4 795 aa13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.62□□□□□ -0.23
CPSF4-206ENST00000441580 DCDC2CA8MYV0 355 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 H7C4K7 107 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 IRAK2O43187 625 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 CREB3O43889 395 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 CXCL10P02778 98 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 GSTA2P09210 222 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 MX2P20592 715 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 AMPD1P23109 780 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 STX2P32856 288 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 GRIK1P39086 918 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 YWHAGP61981 247 aaKnown RBP eCLIP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 CDK16Q00536 496 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 SEMA5AQ13591 1074 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 FASTKD3Q14CZ7 662 aaKnown RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 BBS9Q3SYG4 887 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 BTBD8Q5XKL5 378 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 LRRC31Q6UY01 552 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 CCDC13Q8IYE1 715 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 CNPY4Q8N129 248 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 PYROXD2Q8N2H3 581 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 C2orf15Q8WU43 125 aaKnown RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 FBXO44Q9H4M3 255 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 LRRC4CQ9HCJ2 640 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 ABI2Q9NYB9 513 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 EURLQ9NYK6 297 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-206ENST00000441580 MICAL3Q7RTP6 2002 aa13.61□□□□□ -0.23
CPSF4-206ENST00000441580 VWA8A3KMH1 1905 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 F8W810 466 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 GOLGA8MH3BSY2 632 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 ENPP3O14638 875 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 TNFRSF10BO14763 440 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
CPSF4-206ENST00000441580 VAV1P15498 845 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 FGFR3P22607 806 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 SARNPP82979 210 aaKnown RBP13.6□□□□□ -0.23
CPSF4-206ENST00000441580 TMED2Q15363 201 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 MSANTD2Q6P1R3 559 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 ANKRD33Q7Z3H0 272 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 TADA2BQ86TJ2 420 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 FBXO36Q8NEA4 188 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 BCAS4Q8TDM0 211 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 SERPINB11Q96P15 392 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 CASD1Q96PB1 797 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 DEFB118Q96PH6 123 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 WDCPQ9H6R7 721 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
CPSF4-206ENST00000441580 RNF103O00237 685 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 NDUFAB1O14561 156 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 FGF10O15520 208 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 RTN3O95197 1032 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 CCL5P13501 91 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 CHN1P15882 459 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 RABGGTBP53611 331 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 GEMIN4P57678 1058 aaKnown RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 IFI35P80217 286 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 COG7P83436 770 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 SLC10A2Q12908 348 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 PPP2R5DQ14738 602 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 SKIDA1Q1XH10 827 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 FNBP1LQ5T0N5 605 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 FUT10Q6P4F1 479 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 SPATS2Q86XZ4 545 aaKnown RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 ZNF784Q8NCA9 323 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 CCDC110Q8TBZ0 833 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 ADAM32Q8TC27 787 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 SPPL2BQ8TCT7 592 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 EDEM1Q92611 657 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 RNF34Q969K3 372 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 HDAC11Q96DB2 347 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 XPO6Q96QU8 1125 aaKnown RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 TKTL2Q9H0I9 626 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 CCDC134Q9H6E4 229 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 INTS9Q9NV88 658 aaKnown RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 MARCH5Q9NX47 278 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 LTBP2Q14767 1821 aa13.59□□□□□ -0.23
CPSF4-206ENST00000441580 FNDC1Q4ZHG4 1894 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-206ENST00000441580 TTC3P53804 2025 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 TCRBV7S3A2A0A539 114 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CARNS1A5YM72 827 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 FAM107AO95990 144 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms