RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 KCTD13Q8WZ19 329 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 NDRG1Q92597 394 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SMARCE1Q969G3 411 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SLC35C1Q96A29 364 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 TOE1Q96GM8 510 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 SCNM1Q9BWG6 230 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 CIPCQ9C0C6 399 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 CD93Q9NPY3 652 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 CNGB3Q9NQW8 809 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 ABCC13Q9NSE7 274 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 HOOK1Q9UJC3 728 aaKnown RBP12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 CLEC4EQ9ULY5 219 aa12.15□□□□□ -0.46
UBE2D4-204ENST00000440899 AKAP13Q12802 2813 aa12.15□□□□□ -0.47
UBE2D4-204ENST00000440899 YJEFN3A6XGL0 299 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 C1QTNF9BB2RNN3 333 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 E7ENQ6 273 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 O00370 1275 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 PMM2O15305 246 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 TSPAN3O60637 253 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 LATS1O95835 1130 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 EPHX1P07099 455 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 PAEPP09466 180 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 C1QTNF9P0C862 333 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 ACADMP11310 421 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 NCAM1P13591 858 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 CD59P13987 128 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 SPINK2P20155 84 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 RDXP35241 583 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 SIM1P81133 766 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 ARID5AQ03989 594 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 HNRNPDQ14103 355 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 ADGRF1Q5T601 910 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 TMEM215Q68D42 235 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 UBR7Q8N806 425 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 RBBP8NLQ8NC74 664 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 UBA3Q8TBC4 463 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 DNASE2BQ8WZ79 361 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 EDEM1Q92611 657 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 PRCCQ92733 491 aaPredicted RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 TMA16Q96EY4 203 aaKnown RBP12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 GPR174Q9BXC1 333 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 ZDHHC5Q9C0B5 715 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 STOML2Q9UJZ1 356 aa12.14□□□□□ -0.47
UBE2D4-204ENST00000440899 WDFY3Q8IZQ1 3526 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 A0A1B0GTW7 788 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 SPAARA0A1B0GVQ0 90 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 TMEM8BA6NDV4 472 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 MEI4A8MW99 385 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 KCNJ18B7U540 433 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 H0Y626 953 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 PSMA7O14818 248 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 TRIM16O95361 564 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 IGLV3-19P01714 112 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 MAOBP27338 520 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 HOXD9P28356 352 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 FMO5P49326 533 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 TPMTP51580 245 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 COPAP53621 1224 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 DAOAP59103 153 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 LRMPQ12912 555 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 STILQ15468 1287 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 CNGA2Q16280 664 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 SERPINA13PQ6UXR4 307 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 OR2I1PQ8NGU4 316 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 WFIKKN2Q8TEU8 576 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 SLC35F5Q8WV83 523 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 SORCS1Q8WY21 1168 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 DHTKD1Q96HY7 919 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 CEP63Q96MT8 703 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 SFMBT1Q9UHJ3 866 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 CEP192Q8TEP8 1941 aa12.13□□□□□ -0.47
UBE2D4-204ENST00000440899 DMXL2Q8TDJ6 3036 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 HYAL3O43820 417 aaPredicted RBP12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 GJB3O75712 270 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 LCP1P13796 627 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 PRKCHP24723 683 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 HLA-FP30511 346 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 PPP1R2P41236 205 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 CETN1Q12798 172 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 CAMK2GQ13555 558 aaPredicted RBP12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 KIAA0907Q7Z7F0 614 aaPredicted RBP12.12□□□□□ -0.47
UBE2D4-204ENST00000440899 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms