RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PON1P27169 355 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 APBA1Q02410 837 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 RPL6Q02878 288 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 MEA1Q16626 185 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 PLA2G2CQ5R387 149 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 TCEAL6Q6IPX3 200 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 KIAA1211LQ6NV74 962 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 IRF2BP1Q8IU81 584 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 TMEFF1Q8IYR6 380 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 PIGKQ92643 395 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 TCEAL3Q969E4 200 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 TMA16Q96EY4 203 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 NOX5Q96PH1 765 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 DDX50Q9BQ39 737 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 ACP6Q9NPH0 428 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 HCN2Q9UL51 889 aa20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
SHROOM1-204ENST00000440118 GON4LQ3T8J9 2241 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 A0A1W2PQF6 199 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 E5RJQ4 531 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 KHNYNO15037 678 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 AP5Z1O43299 807 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 ZNF217O75362 1048 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 GABBR2O75899 941 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 NDUFV2P19404 249 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 HOXD9P28356 352 aaPredicted RBP20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 PTK2Q05397 1052 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 PDCLQ13371 301 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 MAP7D1Q3KQU3 841 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 VWA3BQ502W6 1294 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 LYSMD4Q5XG99 296 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 RNF43Q68DV7 783 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 SERPINA13PQ6UXR4 307 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 SLC36A4Q6YBV0 504 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 PASD1Q8IV76 773 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 FRMD1Q8N878 549 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 DQX1Q8TE96 717 aaKnown RBP20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 STK32AQ8WU08 396 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 P2RY11Q96G91 374 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 TUBGCP2Q9BSJ2 902 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 EDEM2Q9BV94 578 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 SYNCQ9H7C4 482 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 CYP8B1Q9UNU6 501 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 CEP83Q9Y592 693 aa20.66■□□□□ 0.9
SHROOM1-204ENST00000440118 NCOR2Q9Y618 2525 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 PI4KAP42356 2102 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 CKAP5Q14008 2032 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 MED19A0JLT2 244 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 KCNJ18B7U540 433 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 WASH3PC4AMC7 463 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 TBL1XO60907 577 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 MOCS2O96007 188 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 APOEP02649 317 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 RING1Q06587 406 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 RAPGEF1Q13905 1077 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 KCNJ12Q14500 433 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 ADAM32Q8TC27 787 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 WFIKKN2Q8TEU8 576 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 DDX1Q92499 740 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 SHC3Q92529 594 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 PIWIL1Q96J94 861 aaKnown RBP20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 PDCL3Q9H2J4 239 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 NDST4Q9H3R1 872 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 ELOVL2Q9NXB9 296 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 THAP10Q9P2Z0 257 aaPredicted RBP20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 STOML2Q9UJZ1 356 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 DNAJC12Q9UKB3 198 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 CLEC4EQ9ULY5 219 aa20.65■□□□□ 0.9
SHROOM1-204ENST00000440118 CNOT1A5YKK6 2376 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 ATXN2Q99700 1313 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 BECN2A8MW95 431 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 IRAK2O43187 625 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 ACSL4O60488 711 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 NDUFS2O75306 463 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 KRT9P35527 623 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 DPP6P42658 865 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 IL12RB1P42701 662 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 FNDC3BQ53EP0 1204 aaKnown RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 STPG1Q5TH74 334 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 RFWD3Q6PCD5 774 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 TAC4Q86UU9 113 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 ZNF557Q8N988 423 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 HJURPQ8NCD3 748 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 SORCS1Q8WY21 1168 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 SLC4A5Q9BY07 1137 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 FAM204AQ9H8W3 233 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 POPDC2Q9HBU9 364 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 ABCB8Q9NUT2 735 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 STIM2Q9P246 746 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 MBD1Q9UIS9 605 aaPredicted RBP20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 TLR6Q9Y2C9 796 aa20.64■□□□□ 0.89
SHROOM1-204ENST00000440118 PAPSS1O43252 624 aaPredicted RBP20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 TIMM44O43615 452 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 IGLV3-27P01718 113 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 EPHX1P07099 455 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 TPM2P07951 284 aa20.63■□□□□ 0.89
SHROOM1-204ENST00000440118 PTGER3P43115 390 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms