RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 CFAP61Q8NHU2 1237 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 AGR3Q8TD06 166 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC2A14Q8TDB8 520 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 MOCOSQ96EN8 888 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 TTC1Q99614 292 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 SYT15Q9BQS2 421 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 KCNK4Q9NYG8 393 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 ZFATQ9P243 1243 aa13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 HBS1LQ9Y450 684 aaKnown RBP13.98□□□□□ -0.17
HERPUD1-204ENST00000439977 FAM159BA6NKW6 160 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CAPN14A8MX76 684 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 MDM4O15151 490 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 MAP3K13O43283 966 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 LUC7L3O95232 432 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 BAG2O95816 211 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ALDOAP04075 364 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 NME3Q13232 169 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 PEX6Q13608 980 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 FAM187BQ17R55 369 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 DCAF6Q58WW2 860 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TEKT4Q8WW24 435 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 HTR3CQ8WXA8 447 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF333Q96JL9 665 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 OSMRQ99650 979 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 NFKBIZQ9BYH8 718 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CACNG4Q9UBN1 327 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 DNAJC16Q9Y2G8 782 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 PPP2R3BQ9Y5P8 575 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CLDN5O00501 218 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 SPTLC1O15269 473 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 KIF1CO43896 1103 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 MFSD11O43934 449 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 HNRNPCL1O60812 293 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 USP1O94782 785 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 SORBS2O94875 1100 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 C6orf222P0C671 652 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 LINGO3P0C6S8 592 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 IGFBP6P24592 240 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 VHLP40337 213 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 IREB2P48200 963 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 PGGT1BP53609 377 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC25A3Q00325 362 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 PDE1BQ01064 536 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 KRT72Q14CN4 511 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TMEM154Q6P9G4 183 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ERO1BQ86YB8 467 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 GPC2Q8N158 579 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 AZIN2Q96A70 460 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 OPTNQ96CV9 577 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 C7orf26Q96N11 449 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 C16orf70Q9BSU1 422 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TUBB6Q9BUF5 446 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 XAB2Q9HCS7 855 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 KIAA1257Q9ULG3 409 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 PCDHA11Q9Y5I1 949 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CCDC78A2IDD5 438 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 KLF11O14901 512 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 GCATO75600 419 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ACAT1P24752 427 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 HOXA11P31270 313 aaPredicted RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CRHR1P34998 444 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 NDUFV1P49821 464 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC34A1Q06495 639 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 DPYSL2Q16555 572 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 MARCH8Q5T0T0 291 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TAPT1Q6NXT6 567 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 CMC1Q7Z7K0 106 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 LMNTD2Q8IXW0 634 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TNS4Q8IZW8 715 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 TFB1MQ8WVM0 346 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 ZNF778Q96MU6 729 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 WWP1Q9H0M0 922 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 MRPL42Q9Y6G3 142 aaKnown RBP13.97□□□□□ -0.17
HERPUD1-204ENST00000439977 BPTFQ12830 3046 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 LOC100653049A0A140TA62 436 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 E7ENQ6 273 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 DPYSL4O14531 572 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 KRT34O76011 436 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 DESP17661 470 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 PSMB4P28070 264 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 MAGEA3P43357 314 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 PDE1CQ14123 709 aaPredicted RBP13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 LRRC36Q1X8D7 754 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 RIPOR1Q6ZS17 1223 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 KBTBD2Q8IY47 623 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 DEFB106AQ8N104 65 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 HIPK4Q8NE63 616 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 MCUQ8NE86 351 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 MAF1Q9H063 256 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 PNPOQ9NVS9 261 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 SCN1AP35498 2009 aa13.96□□□□□ -0.17
HERPUD1-204ENST00000439977 ANK1P16157 1881 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms