RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 FYNP06241 537 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 IL12RB1P42701 662 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 ZNF445P59923 1031 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 MEA1Q16626 185 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 PEAR1Q5VY43 1037 aaPredicted RBP21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 LYSMD4Q5XG99 296 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 TMEM215Q68D42 235 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 UCMAQ8WVF2 138 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 PILRBQ9UKJ0 227 aa21.17■□□□□ 0.98
NCKIPSD-206ENST00000439518 CDX4O14627 284 aaPredicted RBP21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 KRT5P13647 590 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 ITPKAP23677 461 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 HOXD12P35452 270 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 RPL6Q02878 288 aaKnown RBP21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 RING1Q06587 406 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 E2F5Q15329 346 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 FUT11Q495W5 492 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 DENND1BQ6P3S1 775 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 ENOSF1Q7L5Y1 443 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 METTL3Q86U44 580 aaKnown RBP21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 SCUBE3Q8IX30 993 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 STK32AQ8WU08 396 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 TMA16Q96EY4 203 aaKnown RBP21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 CRACR2AQ9BSW2 395 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 MIS12Q9H081 205 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 CYP8B1Q9UNU6 501 aa21.16■□□□□ 0.98
NCKIPSD-206ENST00000439518 TIMM44O43615 452 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 HLA-FP30511 346 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 PI4KAP42356 2102 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 DPP6P42658 865 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 ZNF234Q14588 700 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 STARD3Q14849 445 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 TRIM61Q5EBN2 209 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 TRIM65Q6PJ69 517 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 UNC45BQ8IWX7 931 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 MLKLQ8NB16 471 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 SORCS1Q8WY21 1168 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 GOLGA1Q92805 767 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 AZIN2Q96A70 460 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 SLC4A5Q9BY07 1137 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 IRX2Q9BZI1 471 aaPredicted RBP21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 CIPCQ9C0C6 399 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 CD93Q9NPY3 652 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 TMEM9BQ9NQ34 198 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 CEP295Q9C0D2 2601 aa21.15■□□□□ 0.98
NCKIPSD-206ENST00000439518 SART1O43290 800 aaKnown RBP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 LETM1O95202 739 aaPredicted RBP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 NCAM1P13591 858 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 SLC9A1P19634 815 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 ACADSBP45954 432 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 SGSHP51688 502 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 TBX4P57082 545 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 ZNF33AQ06730 810 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 FAM133BQ5BKY9 247 aaKnown RBP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 MPP7Q5T2T1 576 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 NUGGCQ68CJ6 796 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 GJB7Q6PEY0 223 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 BEND5Q7L4P6 421 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 KIAA0907Q7Z7F0 614 aaPredicted RBP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 SLC41A1Q8IVJ1 513 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 DEFB119Q8N690 84 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 ZNF606Q8WXB4 792 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 FAM81BQ96LP2 452 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 MKRN2Q9H000 416 aaKnown RBP21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 PRDM16Q9HAZ2 1276 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 CYTH4Q9UIA0 394 aa21.14■□□□□ 0.97
NCKIPSD-206ENST00000439518 BECN2A8MW95 431 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 KCNK5O95279 499 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 KCNA4P22459 653 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 PRKCHP24723 683 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 SLC11A2P49281 568 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 LMAN2Q12907 356 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 N4BP2L1Q5TBK1 243 aaPredicted RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 PIK3R6Q5UE93 754 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 DAB2IPQ5VWQ8 1189 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 RFWD3Q6PCD5 774 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 SLC23A3Q6PIS1 610 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 KIAA1324Q6UXG2 1013 aaKnown RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 GBP6Q6ZN66 633 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 TMEM110Q86TL2 294 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 DQX1Q8TE96 717 aaKnown RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 WFIKKN2Q8TEU8 576 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 FCRL2Q96LA5 508 aaPredicted RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 NUSAP1Q9BXS6 441 aaKnown RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 ACP6Q9NPH0 428 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 ITM2CQ9NQX7 267 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 ST7Q9NRC1 585 aa21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 USP36Q9P275 1121 aaKnown RBP21.13■□□□□ 0.97
NCKIPSD-206ENST00000439518 ATXN2Q99700 1313 aaKnown RBP21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 GOLGA6L7A0A1B0GV03 622 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 GTPBP10A4D1E9 387 aaKnown RBP21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 IRAK2O43187 625 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 MED7O43513 233 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 ACSL4O60488 711 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 SLC6A4P31645 630 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 APBA1Q02410 837 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 NNTQ13423 1086 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 ADIPOR2Q86V24 386 aa21.12■□□□□ 0.97
NCKIPSD-206ENST00000439518 CREBRFQ8IUR6 639 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms