RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TPSB2P20231 275 aa15.87■□□□□ 0.13
APP-208ENST00000439274 IRX1P78414 480 aaPredicted RBP15.87■□□□□ 0.13
APP-208ENST00000439274 SLC25A3Q00325 362 aa15.87■□□□□ 0.13
APP-208ENST00000439274 TPSAB1Q15661 275 aa15.87■□□□□ 0.13
APP-208ENST00000439274 N4BP2L1Q5TBK1 243 aaPredicted RBP15.87■□□□□ 0.13
APP-208ENST00000439274 BSPRYQ5W0U4 402 aa15.87■□□□□ 0.13
APP-208ENST00000439274 MBLAC2Q68D91 279 aa15.87■□□□□ 0.13
APP-208ENST00000439274 CCDC185Q8N715 623 aa15.87■□□□□ 0.13
APP-208ENST00000439274 CLMNQ96JQ2 1002 aa15.87■□□□□ 0.13
APP-208ENST00000439274 PGLYRP2Q96PD5 576 aa15.87■□□□□ 0.13
APP-208ENST00000439274 SLC4A5Q9BY07 1137 aa15.87■□□□□ 0.13
APP-208ENST00000439274 THAP1Q9NVV9 213 aa15.87■□□□□ 0.13
APP-208ENST00000439274 MTMR10Q9NXD2 777 aa15.87■□□□□ 0.13
APP-208ENST00000439274 MOCS1Q9NZB8 636 aa15.87■□□□□ 0.13
APP-208ENST00000439274 ITGA11Q9UKX5 1188 aa15.87■□□□□ 0.13
APP-208ENST00000439274 PPM1HQ9ULR3 514 aa15.87■□□□□ 0.13
APP-208ENST00000439274 PSAT1Q9Y617 370 aa15.87■□□□□ 0.13
APP-208ENST00000439274 MYO18AQ92614 2054 aaKnown RBP15.86■□□□□ 0.13
APP-208ENST00000439274 TPP1O14773 563 aa15.86■□□□□ 0.13
APP-208ENST00000439274 BIRC5O15392 142 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SMIM24O75264 130 aa15.86■□□□□ 0.13
APP-208ENST00000439274 DDNO94850 711 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 SERPINA6P08185 405 aa15.86■□□□□ 0.13
APP-208ENST00000439274 GSTA2P09210 222 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SESN2P58004 480 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 WASHC5Q12768 1159 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SLC35F5Q8WV83 523 aa15.86■□□□□ 0.13
APP-208ENST00000439274 USP6NLQ92738 828 aa15.86■□□□□ 0.13
APP-208ENST00000439274 LGMNQ99538 433 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SHCBP1LQ9BZQ2 653 aa15.86■□□□□ 0.13
APP-208ENST00000439274 DPEP3Q9H4B8 488 aa15.86■□□□□ 0.13
APP-208ENST00000439274 AP4E1Q9UPM8 1137 aa15.86■□□□□ 0.13
APP-208ENST00000439274 A6NJR5 290 aa15.86■□□□□ 0.13
APP-208ENST00000439274 F8W8V4 182 aa15.86■□□□□ 0.13
APP-208ENST00000439274 UBTFL6P0CB48 400 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 FGF3P11487 239 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 SERPINB9P50453 376 aa15.86■□□□□ 0.13
APP-208ENST00000439274 ACTR3P61158 418 aa15.86■□□□□ 0.13
APP-208ENST00000439274 TUBB3Q13509 450 aa15.86■□□□□ 0.13
APP-208ENST00000439274 PDE1CQ14123 709 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 Q3C1V9 767 aa15.86■□□□□ 0.13
APP-208ENST00000439274 TEDDM1Q5T9Z0 273 aa15.86■□□□□ 0.13
APP-208ENST00000439274 HEATR6Q6AI08 1181 aaKnown RBP15.86■□□□□ 0.13
APP-208ENST00000439274 TMEM110Q86TL2 294 aa15.86■□□□□ 0.13
APP-208ENST00000439274 MYLK4Q86YV6 388 aaPredicted RBP15.86■□□□□ 0.13
APP-208ENST00000439274 C7orf31Q8N865 590 aa15.86■□□□□ 0.13
APP-208ENST00000439274 GSTCDQ8NEC7 633 aa15.86■□□□□ 0.13
APP-208ENST00000439274 APBB2Q92870 758 aa15.86■□□□□ 0.13
APP-208ENST00000439274 QKIQ96PU8 341 aaKnown RBP eCLIP15.86■□□□□ 0.133e-8■■■■■ 27.1
APP-208ENST00000439274 CSPG4P5Q96PW8 444 aa15.86■□□□□ 0.13
APP-208ENST00000439274 DDX50Q9BQ39 737 aaKnown RBP15.86■□□□□ 0.13
APP-208ENST00000439274 DTLQ9NZJ0 730 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SCOCQ9UIL1 159 aa15.86■□□□□ 0.13
APP-208ENST00000439274 ANGPTL2Q9UKU9 493 aa15.86■□□□□ 0.13
APP-208ENST00000439274 SCN1AP35498 2009 aa15.86■□□□□ 0.13
APP-208ENST00000439274 PAPPA2Q9BXP8 1791 aa15.85■□□□□ 0.13
APP-208ENST00000439274 PPP1R12AO14974 1030 aaPredicted RBP15.85■□□□□ 0.13
APP-208ENST00000439274 SORBS2O94875 1100 aaKnown RBP15.85■□□□□ 0.13
APP-208ENST00000439274 F7P08709 466 aaPredicted RBP15.85■□□□□ 0.13
APP-208ENST00000439274 GOT1P17174 413 aa15.85■□□□□ 0.13
APP-208ENST00000439274 CPOXP36551 454 aa15.85■□□□□ 0.13
APP-208ENST00000439274 SEMA5AQ13591 1074 aa15.85■□□□□ 0.13
APP-208ENST00000439274 ZRSR2Q15696 482 aaKnown RBP15.85■□□□□ 0.13
APP-208ENST00000439274 DPYSL2Q16555 572 aa15.85■□□□□ 0.13
APP-208ENST00000439274 FAM187BQ17R55 369 aa15.85■□□□□ 0.13
APP-208ENST00000439274 SOWAHAQ2M3V2 549 aa15.85■□□□□ 0.13
APP-208ENST00000439274 TRMT5Q32P41 509 aaKnown RBP15.85■□□□□ 0.13
APP-208ENST00000439274 DNAL1Q4LDG9 190 aa15.85■□□□□ 0.13
APP-208ENST00000439274 PPM1JQ5JR12 505 aa15.85■□□□□ 0.13
APP-208ENST00000439274 NCBP2-AS2Q69YL0 99 aa15.85■□□□□ 0.13
APP-208ENST00000439274 IZUMO2Q6UXV1 221 aa15.85■□□□□ 0.13
APP-208ENST00000439274 MAVSQ7Z434 540 aa15.85■□□□□ 0.13
APP-208ENST00000439274 RSPH3Q86UC2 560 aa15.85■□□□□ 0.13
APP-208ENST00000439274 SESTD1Q86VW0 696 aa15.85■□□□□ 0.13
APP-208ENST00000439274 RAB3IL1Q8TBN0 382 aa15.85■□□□□ 0.13
APP-208ENST00000439274 NFKBIZQ9BYH8 718 aa15.85■□□□□ 0.13
APP-208ENST00000439274 VCXQ9H320 206 aa15.85■□□□□ 0.13
APP-208ENST00000439274 XPNPEP3Q9NQH7 507 aa15.85■□□□□ 0.13
APP-208ENST00000439274 KIAA1257Q9ULG3 409 aa15.85■□□□□ 0.13
APP-208ENST00000439274 POLR2AP24928 1970 aaKnown RBP15.85■□□□□ 0.13
APP-208ENST00000439274 PTPRFP10586 1907 aa15.85■□□□□ 0.13
APP-208ENST00000439274 A0A088AWK7 358 aa15.85■□□□□ 0.13
APP-208ENST00000439274 LCP1P13796 627 aa15.85■□□□□ 0.13
APP-208ENST00000439274 MGAT1P26572 445 aa15.85■□□□□ 0.13
APP-208ENST00000439274 SLC1A6P48664 564 aa15.85■□□□□ 0.13
APP-208ENST00000439274 CACNA2D1P54289 1103 aa15.85■□□□□ 0.13
APP-208ENST00000439274 PDE1BQ01064 536 aa15.85■□□□□ 0.13
APP-208ENST00000439274 RALGPS1Q5JS13 557 aa15.85■□□□□ 0.13
APP-208ENST00000439274 FOXB2Q5VYV0 432 aa15.85■□□□□ 0.13
APP-208ENST00000439274 SMYD5Q6GMV2 418 aa15.85■□□□□ 0.13
APP-208ENST00000439274 CES3Q6UWW8 571 aa15.85■□□□□ 0.13
APP-208ENST00000439274 ARCQ7LC44 396 aa15.85■□□□□ 0.13
APP-208ENST00000439274 TSC22D3Q99576 134 aa15.85■□□□□ 0.13
APP-208ENST00000439274 PNPOQ9NVS9 261 aa15.85■□□□□ 0.13
APP-208ENST00000439274 ASB3Q9Y575 518 aa15.85■□□□□ 0.13
APP-208ENST00000439274 IRF6O14896 467 aa15.84■□□□□ 0.13
APP-208ENST00000439274 CCDC130P13994 396 aa15.84■□□□□ 0.13
APP-208ENST00000439274 ARRB2P32121 409 aa15.84■□□□□ 0.13
APP-208ENST00000439274 C6orf163Q5TEZ5 329 aa15.84■□□□□ 0.13
APP-208ENST00000439274 VWA5B1Q5TIE3 1220 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms