RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 CHRNA1P02708 482 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 NQO1P15559 274 aaKnown RBP13.11□□□□□ -0.31
HCG18-236ENST00000438412 ETV4P43268 484 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 SV2CQ496J9 727 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 XKR4Q5GH76 650 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 ANKRD20A2Q5SQ80 823 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 ANKRD20A1Q5TYW2 823 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 ANKRD20A3Q5VUR7 823 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 ZCCHC23Q6ZST2 131 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 MTDHQ86UE4 582 aaKnown RBP13.11□□□□□ -0.31
HCG18-236ENST00000438412 TTC39CQ8N584 583 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 NPWQ8N729 165 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 STK32AQ8WU08 396 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 HTR3CQ8WXA8 447 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 P2RY11Q96G91 374 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 QKIQ96PU8 341 aaKnown RBP eCLIP13.11□□□□□ -0.315e-7■■■■□ 26.5
HCG18-236ENST00000438412 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
HCG18-236ENST00000438412 SMOQ99835 787 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
HCG18-236ENST00000438412 MARCOQ9UEW3 520 aaPredicted RBP13.11□□□□□ -0.31
HCG18-236ENST00000438412 STARD13Q9Y3M8 1113 aa13.11□□□□□ -0.31
HCG18-236ENST00000438412 RNF103O00237 685 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 XPO1O14980 1071 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 MGRN1O60291 552 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 CPT1AP50416 773 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 NEK3P51956 506 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 SNCBQ16143 134 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 TAF1BQ53T94 588 aaPredicted RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 ARMC2Q8NEN0 867 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 ATXN7L3BQ96GX2 97 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 OLFM3Q96PB7 478 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 APOL2Q9BQE5 337 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 PRDM12Q9H4Q4 367 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 MANSC1Q9H8J5 431 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 NOD2Q9HC29 1040 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 SENP1Q9P0U3 644 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 MGEA5O60502 916 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 AP1G2O75843 785 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 ZWINTO95229 277 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 APOEP02649 317 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 ITGB1P05556 798 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 GSTA1P08263 222 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 T-ENOLP0DO92 83 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 NEFHP12036 1026 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 ATP2A2P16615 1042 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 MGAT1P26572 445 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 BRCC3P46736 316 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 RPL34P49207 117 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 PGFP49763 221 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 RNF43Q68DV7 783 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 C16orf46Q6P387 395 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 CDKL3Q8IVW4 592 aaPredicted RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 COLGALT1Q8NBJ5 622 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 TFB1MQ8WVM0 346 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 USP6NLQ92738 828 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 OXNAD1Q96HP4 312 aaPredicted RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 APOPT1Q96IL0 206 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
HCG18-236ENST00000438412 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.1□□□□□ -0.31
HCG18-236ENST00000438412 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 TNPO2O14787 897 aaKnown RBP13.09□□□□□ -0.31
HCG18-236ENST00000438412 RFPL1O75677 317 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 KITP10721 976 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 NCAM1P13591 858 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 ARL4AP40617 200 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 MAGEA3P43357 314 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 NLRP9Q7RTR0 991 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 SLC26A11Q86WA9 606 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 VSIG1Q86XK7 387 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 ZDHHC17Q8IUH5 632 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
HCG18-236ENST00000438412 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 TNIP3Q96KP6 325 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 LRRC37BQ96QE4 947 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 NUDT5Q9UKK9 219 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 GABRQQ9UN88 632 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 TSC2P49815 1807 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 IQANK1A0A1B0GTG1 560 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 FAM237BA0A1B0GVD1 139 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 GCATO75600 419 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 DGKIO75912 1065 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 WARSP23381 471 aaKnown RBP13.09□□□□□ -0.31
HCG18-236ENST00000438412 DEUP1Q05D60 604 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 WASHC5Q12768 1159 aa13.09□□□□□ -0.31
HCG18-236ENST00000438412 CRHR2Q13324 411 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms