RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 STRNO43815 780 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 F9P00740 461 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ACO1P21399 889 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PCSK1P29120 753 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 HADHAP40939 763 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PCSK7Q16549 785 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SPANXN3Q5MJ09 141 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 GRAMD4Q6IC98 578 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 C16orf87Q6PH81 154 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ABI1Q8IZP0 508 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SPATA13Q96N96 652 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TRAPPC9Q96Q05 1148 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 P2RX7Q99572 595 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CHST12Q9NRB3 414 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PLLPQ9Y342 182 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CLUHO75153 1309 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 COL14A1Q05707 1796 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ALS2Q96Q42 1657 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ROBO1Q9Y6N7 1651 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 MAGEB16A2A368 324 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 PRR5-ARHGAP8B1AHC4 643 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 NCAM2O15394 837 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DHX15O43143 795 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 E2F6O75461 281 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DDHD2O94830 711 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 KCNA2P16389 499 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SLC18A1P54219 525 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ABCE1P61221 599 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CRADDP78560 199 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ARHGAP8P85298 464 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ROR2Q01974 943 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 R3HDM1Q15032 1099 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 KHDC1Q4VXA5 237 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 FBXO47Q5MNV8 452 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 THEMIS2Q5TEJ8 643 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 AGAP9Q5VTM2 703 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 EEF1DP3Q658K8 133 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 AMIGO3Q86WK7 504 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SNX32Q86XE0 403 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 C10orf82Q8WW14 230 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 PABPC5Q96DU9 382 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CCDC126Q96EE4 140 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF670Q9BS34 389 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CATSPERBQ9H7T0 1116 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 PKD2L2Q9NZM6 624 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 FETUBQ9UGM5 382 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 AAR2Q9Y312 384 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SNX5Q9Y5X3 404 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 AP1G2O75843 785 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 BPGMP07738 259 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 C6orf222P0C671 652 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 HSPA1AP0DMV8 641 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 HSPA1BP0DMV9 641 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ERVK-10P10266 1014 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 YWHAZP63104 245 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 OCA2Q04671 838 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 UBAP2LQ14157 1087 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 TMEM132BQ14DG7 1078 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 TMCO4Q5TGY1 634 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ZFP1Q6P2D0 407 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 FRA10AC1Q70Z53 315 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DHDDSQ86SQ9 333 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 KCNMB4Q86W47 210 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CHSY1Q86X52 802 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DEFB106AQ8N104 65 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 MAB21L3Q8N8X9 362 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 USP13Q92995 863 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 NR1H4Q96RI1 486 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CDRT15Q96T59 188 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CADM1Q9BY67 442 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 STN1Q9H668 368 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 DHX33Q9H6R0 707 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 NMRAL1Q9HBL8 299 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 KRT82Q9NSB4 513 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 UBP1Q9NZI7 540 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 PCDHGC3Q9UN70 934 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 RIPK3Q9Y572 518 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 PCDHA11Q9Y5I1 949 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SNX13Q9Y5W8 968 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 TRPM3Q9HCF6 1732 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 SUPT7LO94864 414 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ERBB2P04626 1255 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ME2P23368 584 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 GEMP55040 296 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 LAMB3Q13751 1172 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ZNF235Q14590 738 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CATSPERGQ6ZRH7 1159 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 ADGRF2Q8IZF7 708 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 RNF148Q8N7C7 305 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 BANPQ8N9N5 519 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 RBM15BQ8NDT2 890 aaKnown RBP6.86□□□□□ -1.31
CSDE1-205ENST00000438362 OR6Y1Q8NGX8 325 aa6.86□□□□□ -1.31
CSDE1-205ENST00000438362 CXorf38Q8TB03 319 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms