RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNF487B1APH4 448 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 GLP2RO95838 553 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 DDX6P26196 483 aaKnown RBP eCLIP23.85■■□□□ 1.41
CPSF4-204ENST00000436336 CCR2P41597 374 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 MTA1Q13330 715 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 GRIN2CQ14957 1233 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 PPP6R3Q5H9R7 873 aaPredicted RBP23.85■■□□□ 1.41
CPSF4-204ENST00000436336 GRASPQ7Z6J2 395 aaPredicted RBP23.85■■□□□ 1.41
CPSF4-204ENST00000436336 MNS1Q8NEH6 495 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 SHKBP1Q8TBC3 707 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 OSBPL2Q9H1P3 480 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 SLC12A6Q9UHW9 1150 aa23.85■■□□□ 1.41
CPSF4-204ENST00000436336 SOBPA7XYQ1 873 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 HDCP19113 662 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 PRSS36Q5K4E3 855 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 PRPF38BQ5VTL8 546 aaKnown RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 NUGGCQ68CJ6 796 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 UNC45BQ8IWX7 931 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 PYROXD2Q8N2H3 581 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 C12orf76Q8N812 135 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 ATP6V0D2Q8N8Y2 350 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 MAIP1Q8WWC4 291 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 PLD4Q96BZ4 506 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 MAGEB5Q9BZ81 275 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 RCOR3Q9P2K3 495 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 ZNF197O14709 1029 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 RIOK3O14730 519 aaKnown RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 MBL2P11226 248 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 GJA1P17302 382 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 POU3F3P20264 500 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 ZNF135P52742 658 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 ARHGAP15Q53QZ3 475 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 TMC5Q6UXY8 1006 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 ARL14EPQ8N8R7 260 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 MAB21L3Q8N8X9 362 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 TSC1Q92574 1164 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 RPGRIP1Q96KN7 1286 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 KLF16Q9BXK1 252 aaPredicted RBP23.84■■□□□ 1.41
CPSF4-204ENST00000436336 TRIOBPQ9H2D6 2365 aa23.84■■□□□ 1.41
CPSF4-204ENST00000436336 CLUHO75153 1309 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 TRAV19A0A0A6YYK7 116 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 CTAGE15A4D2H0 777 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 MOSPD3O75425 235 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 PAGE1O75459 146 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 TJP3O95049 919 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 HMBSP08397 361 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 CTAGE8P0CG41 777 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 KRT10P13645 584 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 IL4RP24394 825 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 ARL4AP40617 200 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 LLGL1Q15334 1064 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 CTAGE6Q86UF2 777 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 CTAGE4Q8IX94 777 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 FAF2Q96CS3 445 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 TCEAL4Q96EI5 215 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 BTN2A3PQ96KV6 586 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 SLC22A12Q96S37 553 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 CYP2S1Q96SQ9 504 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 HERPUD2Q9BSE4 406 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 HEMGNQ9BXL5 484 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 MTCH2Q9Y6C9 303 aa23.83■■□□□ 1.41
CPSF4-204ENST00000436336 NUP210Q8TEM1 1887 aaPredicted RBP23.83■■□□□ 1.41
CPSF4-204ENST00000436336 PRRC2BQ5JSZ5 2229 aaKnown RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 NRG2O14511 850 aaPredicted RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 LINC01565O15544 149 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 SLU7O95391 586 aaKnown RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 MOCS2O96007 188 aaPredicted RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 NTHL1P78549 312 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ITIH3Q06033 890 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 MMRN1Q13201 1228 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 SEMA3BQ13214 749 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 KLF1Q13351 362 aaPredicted RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ADAM15Q13444 863 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 SLC5A9Q2M3M2 681 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ANKRD20A8PQ5CZ79 823 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ACBD5Q5T8D3 534 aaPredicted RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 KAZNQ674X7 775 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ANKRD54Q6NXT1 300 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 SPATA4Q8NEY3 305 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 RNF157Q96PX1 679 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 MAK16Q9BXY0 300 aaKnown RBP23.82■■□□□ 1.4
CPSF4-204ENST00000436336 OR12D3Q9UGF7 316 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 ZMYM5Q9UJ78 669 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 DOCK4Q8N1I0 1966 aa23.82■■□□□ 1.4
CPSF4-204ENST00000436336 H3BRJ5 948 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 SLC7A9P82251 487 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 TEAD2Q15562 447 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 RARS2Q5T160 578 aaKnown RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 GPR158Q5T848 1215 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 ZFRQ96KR1 1074 aaKnown RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 C1orf74Q96LT6 269 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 EPAS1Q99814 870 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 SLC46A2Q9BY10 475 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 TASP1Q9H6P5 420 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 CWC15Q9P013 229 aaKnown RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 KRIT1O00522 736 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 SOX1O00570 391 aaPredicted RBP23.81■■□□□ 1.4
CPSF4-204ENST00000436336 CREB3O43889 395 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 CKMP06732 381 aa23.81■■□□□ 1.4
CPSF4-204ENST00000436336 GOT1P17174 413 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms