RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 CEP104O60308 925 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
APTX-208ENST00000436040 NEBLO76041 1014 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 GJA1P17302 382 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 DDX6P26196 483 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-208ENST00000436040 SOX5P35711 763 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 DNA2P51530 1060 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 SLC5A3P53794 718 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 USP46P62068 366 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 TMC3Q7Z5M5 1100 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 CCDC63Q8NA47 563 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 ZNF606Q8WXB4 792 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 NXPE3Q969Y0 559 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 MCRS1Q96EZ8 462 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
APTX-208ENST00000436040 FAM129AQ9BZQ8 928 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
APTX-208ENST00000436040 RAB17Q9H0T7 212 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 SAMD15Q9P1V8 674 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 LIMD1Q9UGP4 676 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 TSPAN16Q9UKR8 245 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 PIK3R2O00459 728 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 KRIT1O00522 736 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 GNA15P30679 374 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 PPP3CCP48454 512 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 BCAT1P54687 386 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 HTR4Q13639 388 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 E2F5Q15329 346 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 TRADDQ15628 312 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 CNGA2Q16280 664 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 HIBCHQ6NVY1 386 aaPredicted RBP12.12□□□□□ -0.47
APTX-208ENST00000436040 POTEHQ6S545 545 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 IRF2BP2Q7Z5L9 587 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 OVCA2Q8WZ82 227 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 TLCD1Q96CP7 247 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 STMN4Q9H169 189 aaPredicted RBP12.12□□□□□ -0.47
APTX-208ENST00000436040 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-208ENST00000436040 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
APTX-208ENST00000436040 HELZP42694 1942 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 FAM92AA1XBS5 289 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 THAP12O43422 761 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 RTN2O75298 545 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 MMEP08473 750 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 CYP11B1P15538 503 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 YWHAQP27348 245 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 WEE1P30291 646 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 RNASE9P60153 205 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 CYP4F8P98187 520 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 C2CD6Q53TS8 623 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 GPR158Q5T848 1215 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 GPRIN1Q7Z2K8 1008 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 RASGEF1CQ8N431 466 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 OR2W6PQ8NHA6 318 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 ZSWIM3Q96MP5 696 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 ASB16Q96NS5 453 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 SLITRK1Q96PX8 696 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 FBXO44Q9H4M3 255 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 NCANO14594 1321 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 A0A087X0T9 212 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 A0A0A6YYK5 440 aaPredicted RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 TNFRSF10AO00220 468 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 MED7O43513 233 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 FAM228BP0C875 321 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 SETSIPP0DME0 302 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 STAT1P42224 750 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 STXBP5Q5T5C0 1151 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 DENND1BQ6P3S1 775 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 PDZD8Q8NEN9 1154 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 SCAMP5Q8TAC9 235 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 OLIG1Q8TAK6 271 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 EPS8L1Q8TE68 723 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 SMARCD2Q92925 531 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 PGM2Q96G03 612 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 NAP1L3Q99457 506 aaPredicted RBP12.11□□□□□ -0.47
APTX-208ENST00000436040 KCNK12Q9HB15 430 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 TRPV4Q9HBA0 871 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
APTX-208ENST00000436040 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms