RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 RMI1Q9H9A7 625 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 BARX2Q9UMQ3 279 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 USP18Q9UMW8 372 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 NR2E3Q9Y5X4 410 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 SERPINB2P05120 415 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 SERPINE1P05121 402 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 GARTP22102 1010 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 ADORA2AP29274 412 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 PTPN7P35236 360 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 PPP2R5DQ14738 602 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 EML3Q32P44 896 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 PTPN20Q4JDL3 420 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 FAM196AQ6ZSG2 479 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 NCCRP1Q6ZVX7 275 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 C4orf19Q8IY42 314 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 MYO1HQ8N1T3 1032 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM143Q96AN5 459 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 TARS2Q9BW92 718 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 CISHQ9NSE2 258 aa11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-202ENST00000433297 CCNE2O96020 404 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 P4HA1P13674 534 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 GABRB2P47870 512 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 MYL6P60660 151 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 MTERF2Q49AM1 385 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ERI1Q8IV48 349 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ZNF781Q8N8C0 355 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 RNF169Q8NCN4 708 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 OR52B2Q96RD2 323 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM79Q9BSE2 394 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 SELENONQ9NZV5 590 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM216Q9P0N5 145 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PAK5Q9P286 719 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 EPS15L1Q9UBC2 864 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TUBGCP4Q9UGJ1 667 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TRDMT1O14717 391 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 CHADO15335 359 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 C1QAP02745 245 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ATP5BP06576 529 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TYK2P29597 1187 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 SLC5A3P53794 718 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ABCE1P61221 599 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ART3Q13508 389 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 SWSAP1Q6NVH7 229 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 BNC2Q6ZN30 1099 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 CPNE9Q8IYJ1 553 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 DSELQ8IZU8 1212 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 GFM2Q969S9 779 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 NLRP4Q96MN2 994 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TRPV6Q9H1D0 765 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ARMC7Q9H6L4 198 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 FAIMQ9NVQ4 179 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 ADA2Q9NZK5 511 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PTPN1P18031 435 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PRKCHP24723 683 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 EPHA3P29320 983 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 POLR2BP30876 1174 aaKnown RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 L1CAMP32004 1257 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PCLAFQ15004 111 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TAS1R3Q7RTX0 852 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 HACE1Q8IYU2 909 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 BBS5Q8N3I7 341 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 KYQ8NBH2 561 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 IRGQQ8WZA9 623 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 RCN3Q96D15 328 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 SORT1Q99523 831 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 PLGRKTQ9HBL7 147 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 INIPQ9NRY2 104 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 MAGED2Q9UNF1 606 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-202ENST00000433297 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PLIN3O60664 434 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 SESN2P58004 480 aaPredicted RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 RPL26P61254 145 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TAP1Q03518 808 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 ATP1A4Q13733 1029 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 CES3Q6UWW8 571 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PACS1Q6VY07 963 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 FASTKD5Q7L8L6 764 aaKnown RBP11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 CATSPER1Q8NEC5 780 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 THAP11Q96EK4 314 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TAAR1Q96RJ0 339 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 PLK2Q9NYY3 685 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 EBF1Q9UH73 591 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 TCRBV5S1A1TA0A578 114 aa11.87□□□□□ -0.51
HMGCS1-202ENST00000433297 WDR27A2RRH5 827 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms