RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PEX1O43933 1283 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 KRT38O76015 456 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 URI1O94763 535 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 BAIAP3O94812 1187 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TMEM63AO94886 807 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 DDX58O95786 925 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TBX18O95935 607 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 CHRM2P08172 466 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TMIGD3P0DMS9 266 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ACP5P13686 325 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 APEHP13798 732 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 XBP1P17861 261 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SFPQP23246 707 aaKnown RBP eCLIP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 DUSP1P28562 367 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 IGHMBP2P38935 993 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 PNPLA4P41247 253 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TAS2R50P59544 299 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 CFHR3Q02985 330 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TAP1Q03518 808 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 LMOD3Q0VAK6 560 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 LMAN2Q12907 356 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 FOXI1Q12951 378 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 PDCLQ13371 301 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 CBWD5Q5RIA9 395 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 LY6G5CQ5SRR4 150 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM180BQ6P0A1 224 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 DENND1BQ6P3S1 775 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 KCNV1Q6PIU1 500 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 DSTYKQ6XUX3 929 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 RSRC2Q7L4I2 434 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 MAATS1Q7Z4T9 603 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 LAS2Q8IYD9 372 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SIRT6Q8N6T7 355 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM71DQ8N9W8 422 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 BEND2Q8NDZ0 799 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 PROKR1Q8TCW9 393 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ADAMTS18Q8TE60 1221 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 XAGE5Q8WWM1 108 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ST8SIA4Q92187 359 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TFAP2BQ92481 460 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 RRP36Q96EU6 259 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 FBXL20Q96IG2 436 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 VPS50Q96JG6 964 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 BBC3Q96PG8 261 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 PLEKHG4BQ96PX9 1271 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 FUZQ9BT04 418 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ZHX3Q9H4I2 956 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 PREBQ9HCU5 417 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC2A4RGQ9NR83 387 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 ABHD10Q9NUJ1 306 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SWAP70Q9UH65 585 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 CD207Q9UJ71 328 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 AMFRQ9UKV5 643 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TRPC5Q9UL62 973 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 RRP7AQ9Y3A4 280 aaKnown RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 EPN1Q9Y6I3 576 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SCINQ9Y6U3 715 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 CUX2O14529 1486 aa3.54□□□□□ -1.84
HMGB1P27-201ENST00000431429 SALL3Q9BXA9 1300 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 A0A087X0M5 115 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 A0A1B0GX30 115 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM90A7PA6NKC0 464 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 C3orf70A6NLC5 250 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM90A22PA8MWA6 464 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM90A12PA8MX19 464 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 FAM90A23PA8MXZ1 464 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 AP4M1O00189 453 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 SEPT4O43236 478 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 SUV39H1O43463 412 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 DHX16O60231 1041 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 KAT7O95251 611 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 ESRRBO95718 433 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 HNRNPA1P09651 372 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 HKR1P10072 659 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 NR2F6P10588 404 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 PSMC2P35998 433 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 GRIA3P42263 894 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 CCT4P50991 539 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 RBM5P52756 815 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 RCAN1P53805 252 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 CTSWP56202 376 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 RAE1P78406 368 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 TXNL4AP83876 142 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 GAB1Q13480 694 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 BFSP2Q13515 415 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 THOC5Q13769 683 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 SPATS1Q496A3 300 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 AARS2Q5JTZ9 985 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 GPATCH4Q5T3I0 446 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 NAA35Q5VZE5 725 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 ERICH6BQ5W0A0 696 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 KRT27Q7Z3Y8 459 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 PEG10Q86TG7 708 aaKnown RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 C12orf76Q8N812 135 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 LINS1Q8NG48 757 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 CLEC4CQ8WTT0 213 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 TBC1D22AQ8WUA7 517 aa3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 CENPIQ92674 756 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P27-201ENST00000431429 HVCN1Q96D96 273 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms