RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 OR6C75A6NL08 312 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 TM9SF1O15321 606 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 DCXO43602 365 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 TADA2AO75478 443 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ZWINTO95229 277 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LSM8O95777 96 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 EPCAMP16422 314 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CLCNKBP51801 687 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ZXDAP98168 799 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 RNASEH2BQ5TBB1 312 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ZFAND2BQ8WV99 257 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF653Q96CK0 615 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ZBTB45Q96K62 511 aaPredicted RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CENPHQ9H3R5 247 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 GDAP2Q9NXN4 497 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 TBC1D30Q9Y2I9 924 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 SCINQ9Y6U3 715 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 CLUHO75153 1309 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 NT5C1B-RDH14C9J2C7 533 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 TPBGLP0DKB5 382 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 BRAFP15056 766 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ATF2P15336 505 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 NOMO3P69849 1222 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 PSMD5Q16401 504 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 LONRF1Q17RB8 773 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 APPL2Q8NEU8 664 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 STK32AQ8WU08 396 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 ALKBH8Q96BT7 664 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 NT5C1BQ96P26 610 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 PAAF1Q9BRP4 392 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 VRTNQ9H8Y1 702 aa9.94□□□□□ -0.82
NEDD1-203ENST00000429527 DDX43Q9NXZ2 648 aaKnown RBP9.94□□□□□ -0.82
NEDD1-203ENST00000429527 C3orf70A6NLC5 250 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 LACTBL1A8MY62 500 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 TGM5O43548 720 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ATP6V1C1P21283 382 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 PNPLA4P41247 253 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 MLLT6P55198 1093 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 OCRLQ01968 901 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 MESDQ14696 234 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ZACNQ401N2 412 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 CES5AQ6NT32 575 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ADGRD1Q6QNK2 874 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 VSIG1Q86XK7 387 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 RCOR2Q8IZ40 523 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 SLC35B2Q8TB61 432 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 CCDC77Q9BR77 488 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 FAM124BQ9H5Z6 455 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 TRPV4Q9HBA0 871 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 KLK14Q9P0G3 267 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 SFI1A8K8P3 1242 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 CYP26A1O43174 497 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 C4BPAP04003 597 aaKnown RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 FESP07332 822 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 RRM1P23921 792 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 MAGEA6P43360 314 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ANKRD20A2Q5SQ80 823 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ANKRD20A1Q5TYW2 823 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ANKRD20A3Q5VUR7 823 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 CCDC149Q6ZUS6 474 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 FBF1Q8TES7 1133 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 KAT5Q92993 513 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 VPS11Q9H270 941 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 PCDH9Q9HC56 1237 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 MAN1C1Q9NR34 630 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ANAPC5Q9UJX4 755 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 AGO2Q9UKV8 859 aaKnown RBP9.93□□□□□ -0.82
NEDD1-203ENST00000429527 ITGA11Q9UKX5 1188 aa9.93□□□□□ -0.82
NEDD1-203ENST00000429527 CREB1P16220 341 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ABL2P42684 1182 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 RPL26P61254 145 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 C9orf57Q5W0N0 161 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 RAB3IL1Q8TBN0 382 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 FNIP1Q8TF40 1166 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 KLHL29Q96CT2 875 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 RBM41Q96IZ5 413 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PKMYT1Q99640 499 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 MSTO1Q9BUK6 570 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 TRIM31Q9BZY9 425 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ZNF518BQ9C0D4 1074 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ZHX3Q9H4I2 956 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 MRPL47Q9HD33 250 aaKnown RBP9.92□□□□□ -0.82
NEDD1-203ENST00000429527 IGSF9Q9P2J2 1179 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 GRID1Q9ULK0 1009 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 C1QAP02745 245 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 SLC18A2Q05940 514 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PLD1Q13393 1074 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 MAMLD1Q13495 774 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ARHGAP44Q17R89 818 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PRSS36Q5K4E3 855 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 ATAT1Q5SQI0 421 aa9.92□□□□□ -0.82
NEDD1-203ENST00000429527 PCGF5Q86SE9 256 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms