RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 EPHA3P29320 983 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 ZNF143P52747 638 aaPredicted RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 SLC18A2Q05940 514 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 CYTH1Q15438 398 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 TMEM198Q66K66 360 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 OLFML2BQ68BL8 750 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 LAYNQ6UX15 382 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 ATG14Q6ZNE5 492 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 CCNYL1Q8N7R7 359 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 PIWIL2Q8TC59 973 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 ATP2A3Q93084 1043 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 TMA16Q96EY4 203 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 AGAP2Q99490 1192 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 MRPL45Q9BRJ2 306 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 OCEL1Q9H607 264 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 PCDHGB4Q9UN71 923 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 PCDHGB5Q9Y5G0 923 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 DOCK5Q9H7D0 1870 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 SIN3BO75182 1162 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 TBL3Q12788 808 aaKnown RBP12.86□□□□□ -0.35
CDH3-202ENST00000429102 FRMD7Q6ZUT3 714 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 MOB2Q70IA6 237 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 CCDC185Q8N715 623 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 XPNPEP3Q9NQH7 507 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 WDR35Q9P2L0 1181 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
CDH3-202ENST00000429102 E7ESA3 106 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ARSAP15289 507 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 FGFR3P22607 806 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 IL4RP24394 825 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PDE1CQ14123 709 aaPredicted RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 GK3PQ14409 553 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ACAP1Q15027 740 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 HSP90AA5PQ58FG0 334 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZBTB46Q86UZ6 589 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PLD6Q8N2A8 252 aaKnown RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 GSDMBQ8TAX9 411 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 DHRS4Q9BTZ2 278 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 STYXL1Q9Y6J8 313 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 A8MXQ7 604 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 SPATA31D3P0C874 917 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ACAT1P24752 427 aaKnown RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 PSMB4P28070 264 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 RAB27AP51159 221 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 IRF9Q00978 393 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 OCRLQ01968 901 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PDCD2Q16342 344 aaPredicted RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 DCAF6Q58WW2 860 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 SPATA31D4Q6ZUB0 917 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 SNRNP27Q8WVK2 155 aaKnown RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZNF778Q96MU6 729 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 SEMA6AQ9H2E6 1030 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PLAC1Q9HBJ0 212 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 C2CD4BA6NLJ0 364 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 AHCYL1O43865 530 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 DHRS4L1P0CG22 281 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 RALBP11234 206 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 AKAP5P24588 427 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 LAMB3Q13751 1172 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZNF781Q8N8C0 355 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 OR52K1Q8NGK4 314 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 OR6Y1Q8NGX8 325 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 ZNF398Q8TD17 642 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 EBNA1BP2Q99848 306 aaKnown RBP12.85□□□□□ -0.35
CDH3-202ENST00000429102 OMDQ99983 421 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 TLE6Q9H808 572 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 THAP1Q9NVV9 213 aa12.85□□□□□ -0.35
CDH3-202ENST00000429102 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 A0A088AWK7 358 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 FESP07332 822 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 EFNA5P52803 228 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 ACTR3P61158 418 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 TMEM132DQ14C87 1099 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CNPY1Q3B7I2 92 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CEP70Q8NHQ1 597 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 C18orf25Q96B23 403 aaPredicted RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 COPS7BQ9H9Q2 264 aaPredicted RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 GOLGA2P5Q9HBQ8 144 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 CNTN3Q9P232 1028 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 KLHL8Q9P2G9 620 aaPredicted RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 SYNPO2Q9UMS6 1093 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
CDH3-202ENST00000429102 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
CDH3-202ENST00000429102 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms