RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ANKRD20A3Q5VUR7 823 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 UNC5AQ6ZN44 842 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 ZNF534Q76KX8 674 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 PRPF39Q86UA1 669 aaKnown RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 RASAL3Q86YV0 1011 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 CCNJLQ8IV13 435 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 SENP8Q96LD8 212 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 KLF6Q99612 283 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 DDX43Q9NXZ2 648 aaKnown RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 RAD54BQ9Y620 910 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 FAM159BA6NKW6 160 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 FAM155AB1AL88 458 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 CLDN5O00501 218 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 CAPN9O14815 690 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 DUSP11O75319 330 aaKnown RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 C1QAP02745 245 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 THP07101 528 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 NEFHP12036 1026 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 CNTFP26441 200 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 SLC8A1P32418 973 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 GLUD2P49448 558 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 PRKD1Q15139 912 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 OTUD1Q5VV17 481 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 C17orf99Q6UX52 265 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 DENND5BQ6ZUT9 1274 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 CYS1Q717R9 158 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 PYROXD2Q8N2H3 581 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 NTAN1Q96AB6 310 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 ERP27Q96DN0 273 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 SIGLEC10Q96LC7 697 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 ZFP42Q96MM3 310 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 RAB3IPQ96QF0 476 aaPredicted RBP14.13□□□□□ -0.15
THBS3-202ENST00000428962 MYLK2Q9H1R3 596 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 CNGB3Q9NQW8 809 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 ARHGEF3Q9NR81 526 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 RRN3Q9NYV6 651 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
THBS3-202ENST00000428962 WDR91A4D1P6 747 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 C9IYK1 514 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 RNF103O00237 685 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 EEF2KO00418 725 aaKnown RBP14.12□□□□□ -0.15
THBS3-202ENST00000428962 C2CD2LO14523 706 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 TNPO2O14787 897 aaKnown RBP14.12□□□□□ -0.15
THBS3-202ENST00000428962 ATP6V1G2O95670 118 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 IL1BP01584 269 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 IGHA2P01877 340 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 SLC10A3P09131 477 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
THBS3-202ENST00000428962 RARBP10826 455 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 VAV1P15498 845 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 MLH1P40692 756 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 CCNFP41002 786 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 ETV4P43268 484 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 MAP3K7CLP57077 242 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 GJA9P57773 515 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 PAFAH1B3Q15102 231 aaKnown RBP14.12□□□□□ -0.15
THBS3-202ENST00000428962 COL13A1Q5TAT6 717 aaPredicted RBP14.12□□□□□ -0.15
THBS3-202ENST00000428962 DSTYKQ6XUX3 929 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 SH2D5Q6ZV89 423 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 PAQR9Q6ZVX9 377 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 ASRGL1Q7L266 308 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 FAM35AQ86V20 835 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 DEPDC1BQ8WUY9 529 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 STAMBPL1Q96FJ0 436 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 FAM111AQ96PZ2 611 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 TSSK1BQ9BXA7 367 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 GIT1Q9Y2X7 761 aa14.12□□□□□ -0.15
THBS3-202ENST00000428962 KLF11O14901 512 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CREB3O43889 395 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 AP1G2O75843 785 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 BEST1O76090 585 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 PCSK1P29120 753 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 RASSF2P50749 326 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ZNF135P52742 658 aaPredicted RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 AP1B1Q10567 949 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SCAPQ12770 1279 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 NME3Q13232 169 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 NAB1Q13506 487 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 DPYSQ14117 519 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 STEAP4Q687X5 459 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 LRRC8BQ6P9F7 803 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 ZNF276Q8N554 614 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 COLGALT1Q8NBJ5 622 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 SLC7A14Q8TBB6 771 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 LRRN4Q8WUT4 740 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 CDKL2Q92772 493 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 TTC17Q96AE7 1141 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 THOC1Q96FV9 657 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
THBS3-202ENST00000428962 NAT9Q9BTE0 207 aa14.11□□□□□ -0.15
THBS3-202ENST00000428962 NPHS2Q9NP85 383 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms