RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 KCTD6Q8NC69 237 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 SHKBP1Q8TBC3 707 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 RNF139Q8WU17 664 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 NT5C3BQ969T7 300 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZFYVE19Q96K21 471 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 LRRC3BQ96PB8 259 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLITRK1Q96PX8 696 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 MARCH2Q9P0N8 246 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 VANGL2Q9ULK5 521 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 ACTL7AQ9Y615 435 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 ESYT3A0FGR9 886 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CKMP06732 381 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 VIPR2P41587 438 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 RAB30Q15771 203 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 SPATA18Q8TC71 538 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 ADAMTS19Q8TE59 1207 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CENPIQ92674 756 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CELF6Q96J87 481 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 SPATA17Q96L03 361 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 WDCPQ9H6R7 721 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 PRDM6Q9NQX0 595 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 ASNSD1Q9NWL6 643 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CLDND1Q9NY35 253 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 CWC15Q9P013 229 aaKnown RBP9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 LZTS1Q9Y250 596 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 HEY1Q9Y5J3 304 aa9.88□□□□□ -0.83
HMGCLL1-206ENST00000428842 PAGE1O75459 146 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CNTN5O94779 1100 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RB1P06400 928 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RHOXF2BP0C7M4 288 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ETS1P14921 441 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 HDCP19113 662 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 L1CAMP32004 1257 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 GSCP56915 257 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 DPYSL3Q14195 570 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 LONRF2Q1L5Z9 754 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 PIK3R6Q5UE93 754 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RAP1GAP2Q684P5 730 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 NADSYN1Q6IA69 706 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 TTC27Q6P3X3 843 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 SYCE2Q6PIF2 218 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZC3H18Q86VM9 953 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RHOT1Q8IXI2 618 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RHOXF2Q9BQY4 288 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 FBXO44Q9H4M3 255 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 TLR8Q9NR97 1041 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ABCC13Q9NSE7 274 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 IL37Q9NZH6 218 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CPQQ9Y646 472 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CFAP54Q96N23 3096 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRIM24O15164 1050 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 IRAK2O43187 625 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 FBXO21O94952 628 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CSH1P0DML2 217 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CSH2P0DML3 217 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 BMP1P13497 986 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 KDELR1P24390 212 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC6A4P31645 630 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RDXP35241 583 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 VPS41P49754 854 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RWDD2BP57060 319 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 GBE1Q04446 702 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 SLC10A2Q12908 348 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 VEPH1Q14D04 833 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 DUSP6Q16828 381 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 BEND6Q5SZJ8 279 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARTNQ5T4W7 220 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 NAIF1Q69YI7 327 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 TRIM68Q6AZZ1 485 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 RWDD4Q6NW29 188 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 GET4Q7L5D6 327 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 OR52K2Q8NGK3 314 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 PCDH19Q8TAB3 1148 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 SMG7Q92540 1137 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 MRPL38Q96DV4 380 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 LINC00597Q9H2U6 94 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 PIDD1Q9HB75 910 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 PCDH18Q9HCL0 1135 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 PNPLA8Q9NP80 782 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CLEC1BQ9P126 229 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
HMGCLL1-206ENST00000428842 CST8O60676 142 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZDHHC11BP0C7U3 371 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ZSCAN5DPP0CG00 497 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 MBL2P11226 248 aaPredicted RBP9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 PAX3P23760 479 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ADRA1BP35368 520 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 LTBRP36941 435 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 CDKN2BP42772 138 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 PTPN9P43378 593 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 TCEAL1Q15170 157 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ALFQ53S48 1182 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 GPR158Q5T848 1215 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 SPOCD1Q6ZMY3 1216 aa9.86□□□□□ -0.83
HMGCLL1-206ENST00000428842 ARHGAP36Q6ZRI8 547 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms