RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RESP18Q5W5W9 173 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 MARCH9Q86YJ5 346 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 C1orf216Q8TAB5 229 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 TAS1R2Q8TE23 839 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 LRIG1Q96JA1 1093 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 PCED1AQ9H1Q7 454 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 SERTAD1Q9UHV2 236 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 PCDHA7Q9UN72 937 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 BTBD3Q9Y2F9 522 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 SLCO1B1Q9Y6L6 691 aa19.18■□□□□ 0.66
UPK3BP1-201ENST00000428678 FLNBO75369 2602 aaKnown RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 TRIM49P0CI25 452 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 TRIM49CP0CI26 452 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 GCLMP48507 274 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 SUZ12Q15022 739 aaKnown RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 KIF19Q2TAC6 998 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 KMT5BQ4FZB7 885 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 FNDC3BQ53EP0 1204 aaKnown RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 ZNF394Q53GI3 561 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 TMEM215Q68D42 235 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 ARHGAP18Q8N392 663 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 CPXM2Q8N436 756 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 RBBP8NLQ8NC74 664 aaPredicted RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 OR2T3Q8NH03 318 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 HEXIM2Q96MH2 286 aaKnown RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 SLC2A11Q9BYW1 496 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 LHX5Q9H2C1 402 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 C6orf106Q9H6K1 298 aaPredicted RBP19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 MMRN2Q9H8L6 949 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 TMEM131Q92545 1883 aa19.17■□□□□ 0.66
UPK3BP1-201ENST00000428678 K7ELQ4 463 aaPredicted RBP19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 TIMM44O43615 452 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 CALUO43852 315 aaPredicted RBP19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 SLFN14P0C7P3 912 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 ACSL1P33121 698 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 CYP4F3Q08477 520 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 TEAD4Q15561 434 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 CCDC157Q569K6 752 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 DBX2Q6ZNG2 339 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 GALNT15Q8N3T1 639 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 CCDC150Q8NCX0 1101 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 ARID3AQ99856 593 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 SNX11Q9Y5W9 270 aa19.16■□□□□ 0.66
UPK3BP1-201ENST00000428678 TSPAN3O60637 253 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 YWHAGP61981 247 aaKnown RBP eCLIP19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 PPP3CAQ08209 521 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 CAMK2GQ13555 558 aaPredicted RBP19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 ZNF366Q8N895 744 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 CYB5D2Q8WUJ1 264 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 PLD4Q96BZ4 506 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 PAGE5Q96GU1 130 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 TM9SF3Q9HD45 589 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 SCUBE2Q9NQ36 999 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 DKK4Q9UBT3 224 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 ANKRD6Q9Y2G4 727 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 KALRNO60229 2985 aa19.15■□□□□ 0.66
UPK3BP1-201ENST00000428678 FAM149AA5PLN7 773 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 TRABD2BA6NFA1 517 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 EIF4E1BA6NMX2 242 aaKnown RBP19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 ACTN4O43707 911 aaKnown RBP19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 DKK1O94907 266 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 KRT13P13646 458 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 GRK6P43250 576 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 MPPE1Q53F39 396 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 LAYNQ6UX15 382 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 INTS8Q75QN2 995 aaKnown RBP19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 PIGZQ86VD9 579 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 FAM217AQ8IXS0 508 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 PLA2G4CQ9UP65 541 aa19.14■□□□□ 0.65
UPK3BP1-201ENST00000428678 KCNK3O14649 394 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 MAPK13O15264 365 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 TNFSF14O43557 240 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 FSBPO95073 299 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 SEMA4FO95754 770 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 NR2F2P24468 414 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 HOXD9P28356 352 aaPredicted RBP19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 GRIA4P48058 902 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 HARS2P49590 506 aaKnown RBP19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 CCT8P50990 548 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 SLC8A3P57103 927 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 FAM186BQ8IYM0 893 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 ENGASEQ8NFI3 743 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 WFIKKN2Q8TEU8 576 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 BBC3Q96PG8 261 aaPredicted RBP19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 BTBD1Q9H0C5 482 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 TRAF3IP3Q9Y228 551 aa19.13■□□□□ 0.65
UPK3BP1-201ENST00000428678 ZBED1O96006 694 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 DNTTP04053 509 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 HLA-FP30511 346 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 TKTL1P51854 596 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 TRIP4Q15650 581 aaPredicted RBP19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 RAB41Q5JT25 222 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 CHST9Q7L1S5 443 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 ADAT2Q7Z6V5 191 aaKnown RBP19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 FMNL3Q8IVF7 1028 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 SLC4A11Q8NBS3 891 aa19.12■□□□□ 0.65
UPK3BP1-201ENST00000428678 NDRG1Q92597 394 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms