RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 LCP1P13796 627 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 BRD2P25440 801 aaKnown RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 HLA-FP30511 346 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 SLC8A3P57103 927 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 SEMA3BQ13214 749 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 ARHGEF19Q8IW93 802 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 SCML4Q8N228 414 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 WFDC5Q8TCV5 224 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 DDI1Q8WTU0 396 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 TMEM121BQ9BXQ6 578 aaPredicted RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 PRDM16Q9HAZ2 1276 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 WSB2Q9NYS7 404 aaPredicted RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 STOML2Q9UJZ1 356 aa16.21■□□□□ 0.19
SEC13-210ENST00000428626 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.21■□□□□ 0.19
SEC13-210ENST00000428626 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.19
SEC13-210ENST00000428626 C1QTNF9BB2RNN3 333 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 PSMA7O14818 248 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 PMM2O15305 246 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 C1QTNF9P0C862 333 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 SETSIPP0DME0 302 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 NCAM1P13591 858 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 HLA-EP13747 358 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 TBXAS1P24557 533 aaPredicted RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 DPP6P42658 865 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 FAM193AP78312 1265 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 KLHL10Q6JEL2 608 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 RRAGAQ7L523 313 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 METTL3Q86U44 580 aaKnown RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 CACUL1Q86Y37 369 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 TMPRSS6Q8IU80 811 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 SIX6OS1Q8N1H7 587 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 CEP76Q8TAP6 659 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 TOE1Q96GM8 510 aaKnown RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 CEP63Q96MT8 703 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 SLC2A11Q9BYW1 496 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 CIPCQ9C0C6 399 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 METTL14Q9HCE5 456 aaKnown RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 CNGB3Q9NQW8 809 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 ITM2CQ9NQX7 267 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 OLA1Q9NTK5 396 aaKnown RBP16.2■□□□□ 0.18
SEC13-210ENST00000428626 PCDHB4Q9Y5E5 795 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 ZZEF1O43149 2961 aa16.2■□□□□ 0.18
SEC13-210ENST00000428626 GOLGA6L7A0A1B0GV03 622 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 SPAARA0A1B0GVQ0 90 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ARHGAP33O14559 1287 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ZBTB24O43167 697 aaPredicted RBP16.19■□□□□ 0.18
SEC13-210ENST00000428626 GADD45BO75293 160 aaPredicted RBP16.19■□□□□ 0.18
SEC13-210ENST00000428626 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CYBBP04839 570 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 FYNP06241 537 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 PAEPP09466 180 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CD59P13987 128 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CD6P30203 668 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 TPMTP51580 245 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ZNF132P52740 706 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 NUCB2P80303 420 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 GFPT1Q06210 699 aaPredicted RBP16.19■□□□□ 0.18
SEC13-210ENST00000428626 MORC3Q14149 939 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 STARD3Q14849 445 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CNGA2Q16280 664 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CCDC40Q4G0X9 1142 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 MPPE1Q53F39 396 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 RFWD3Q6PCD5 774 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ELOA2Q8IYF1 753 aaPredicted RBP16.19■□□□□ 0.18
SEC13-210ENST00000428626 PPM1KQ8N3J5 372 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 MINDY1Q8N5J2 469 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ZNF366Q8N895 744 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 RNF139Q8WU17 664 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 CYB5D2Q8WUJ1 264 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 KREMEN1Q96MU8 473 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 NT5C1BQ96P26 610 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 ABCC13Q9NSE7 274 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 SLCO1B1Q9Y6L6 691 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 WDFY3Q8IZQ1 3526 aa16.19■□□□□ 0.18
SEC13-210ENST00000428626 M0QYV0 167 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 BIN1O00499 593 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 NPC1O15118 1278 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 NDUFS2O75306 463 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 GJB3O75712 270 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 SLC6A4P31645 630 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 HARS2P49590 506 aaKnown RBP16.18■□□□□ 0.18
SEC13-210ENST00000428626 STX17P56962 302 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 EIF4HQ15056 248 aaKnown RBP16.18■□□□□ 0.18
SEC13-210ENST00000428626 PTPRNQ16849 979 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 FAM133BQ5BKY9 247 aaKnown RBP16.18■□□□□ 0.18
SEC13-210ENST00000428626 ADGRF1Q5T601 910 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 NADSYN1Q6IA69 706 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 KIAA0907Q7Z7F0 614 aaPredicted RBP16.18■□□□□ 0.18
SEC13-210ENST00000428626 ADIPOR2Q86V24 386 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 TRIM59Q8IWR1 403 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 RGL4Q8IZJ4 473 aa16.18■□□□□ 0.18
SEC13-210ENST00000428626 UCMAQ8WVF2 138 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms