RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.84□□□□□ -1.95
R3HDM1-205ENST00000425804 LRRIQ1Q96JM4 1722 aa2.84□□□□□ -1.96
R3HDM1-205ENST00000425804 MYO5CQ9NQX4 1742 aa2.84□□□□□ -1.96
R3HDM1-205ENST00000425804 TROQ12816 1431 aaPredicted RBP2.84□□□□□ -1.96
R3HDM1-205ENST00000425804 NUP153P49790 1475 aaKnown RBP2.84□□□□□ -1.96
R3HDM1-205ENST00000425804 PLB1Q6P1J6 1458 aa2.84□□□□□ -1.96
R3HDM1-205ENST00000425804 CFAP74Q9C0B2 1584 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 MAP3K4Q9Y6R4 1608 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SIGLEC1Q9BZZ2 1709 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 RASA4BC9J798 803 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 FAM227AF5H4B4 570 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 M0R3H8 397 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 NCAM2O15394 837 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SLC16A6O15403 523 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 RASA4O43374 803 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 AP1G1O43747 822 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 PQBP1O60828 265 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TMCC2O75069 709 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TULP3O75386 442 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 BAIAP3O94812 1187 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 CAPN3P20807 821 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SOX8P57073 446 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ZNF91Q05481 1191 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TUBB8Q3ZCM7 444 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 CCDC157Q569K6 752 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ZNF618Q5T7W0 954 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 THEMIS2Q5TEJ8 643 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SPATA1Q5VX52 437 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 RGS7BPQ6MZT1 257 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 FAM180BQ6P0A1 224 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 B3GNT9Q6UX72 402 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ZNF813Q6ZN06 617 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 C4orf50Q6ZRC1 276 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 CCDC149Q6ZUS6 474 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 BRINP3Q76B58 766 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 DTX2Q86UW9 622 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SKAP1Q86WV1 359 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 COL23A1Q86Y22 540 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ARFGAP1Q8N6T3 406 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 HDAC2Q92769 488 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 GOLGA1Q92805 767 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ZBTB10Q96DT7 871 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 MVB12AQ96EY5 273 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TSPAN18Q96SJ8 248 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 AP1M1Q9BXS5 423 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 WDR12Q9GZL7 423 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SLC12A5Q9H2X9 1139 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 MRPL44Q9H9J2 332 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 SH3GLB2Q9NR46 395 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 DUSP22Q9NRW4 184 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 HELLSQ9NRZ9 838 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TBC1D22BQ9NU19 505 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 STAP2Q9UGK3 403 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 TPCN1Q9ULQ1 816 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 ISY1Q9ULR0 285 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 HS3ST3B1Q9Y662 390 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.83□□□□□ -1.964e-8■■□□□ 13.5
R3HDM1-205ENST00000425804 CCNB3Q8WWL7 1395 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 MYOM3Q5VTT5 1437 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 MIA2Q96PC5 1412 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 RRBP1Q9P2E9 1410 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 NCOA2Q15596 1464 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 CDK13Q14004 1512 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 KDM5BQ9UGL1 1544 aa2.83□□□□□ -1.96
R3HDM1-205ENST00000425804 PTPN23Q9H3S7 1636 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ANKRD18BA2A2Z9 1011 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 H7C1Q1 480 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 DTNBO60941 627 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 SOAT2O75908 522 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 PDE8BO95263 885 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ARIH2O95376 493 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 CHRM5P08912 532 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 IFIT1P09914 478 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 RPS6KB1P23443 525 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ATICP31939 592 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 PXNP49023 591 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 G3BP1Q13283 466 aaKnown RBP eCLIP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 BLMHQ13867 455 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ZNF267Q14586 743 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ZIK1Q3SY52 487 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 KHDC1LQ5JSQ8 128 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 TEDDM1Q5T9Z0 273 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ARMC3Q5W041 872 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 RETSATQ6NUM9 610 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 DPP9Q86TI2 863 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 GRAMD1CQ8IYS0 662 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 NDUFAF2Q8N183 169 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 LRRC71Q8N4P6 559 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 OR2C3Q8N628 320 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 MYCT1Q8N699 235 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 NKAIN3Q8N8D7 197 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 ZBTB34Q8NCN2 500 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 RSPH1Q8WYR4 309 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 GLG1Q92896 1179 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 USP13Q92995 863 aaPredicted RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 R3HDM4Q96D70 268 aa2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 DAZAP1Q96EP5 407 aaKnown RBP2.82□□□□□ -1.96
R3HDM1-205ENST00000425804 LTV1Q96GA3 475 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms