RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ACADSBP45954 432 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 GABRB2P47870 512 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 PPP3CCP48454 512 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 DAOAP59103 153 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 ZP2Q05996 745 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 FAM78AQ5JUQ0 283 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 PPP1R15BQ5SWA1 713 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 HFE2Q6ZVN8 426 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHOX2-202ENST00000425436 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 MON1AQ86VX9 555 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 RCOR2Q8IZ40 523 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 MREGQ8N565 214 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 C12orf50Q8NA57 414 aaPredicted RBP16.25■□□□□ 0.19
SHOX2-202ENST00000425436 EXD1Q8NHP7 514 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 OVCA2Q8WZ82 227 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 MAGOHBQ96A72 148 aaKnown RBP16.25■□□□□ 0.19
SHOX2-202ENST00000425436 FAM129AQ9BZQ8 928 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 SYNCQ9H7C4 482 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 DDX56Q9NY93 547 aaKnown RBP16.25■□□□□ 0.19
SHOX2-202ENST00000425436 GDE1Q9NZC3 331 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 AMACRQ9UHK6 382 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 LOC730098B7Z3J9 87 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 KRT3P12035 628 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 RARGP13631 454 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 HDCP19113 662 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 VIPR2P41587 438 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 CARSP49589 748 aaKnown RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 COPS2P61201 443 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 TJAP1Q5JTD0 557 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 PARM1Q6UWI2 310 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 SYDE1Q6ZW31 735 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 CASKIN2Q8WXE0 1202 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 EDEM1Q92611 657 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 LRRC45Q96CN5 670 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 RBM41Q96IZ5 413 aaKnown RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 PIWIL1Q96J94 861 aaKnown RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 RPP25Q9BUL9 199 aaKnown RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 LRRC19Q9H756 370 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 EPS15L1Q9UBC2 864 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 PRKAG3Q9UGI9 489 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 HPCAL4Q9UM19 191 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 FBXO21O94952 628 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 MYBL2P10244 700 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 MARCKSL1P49006 195 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 GABPB1Q06547 395 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 TAF5Q15542 800 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 HECTD3Q5T447 861 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 BSPRYQ5W0U4 402 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 TANGO2Q6ICL3 276 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 OR6B2Q6IFH4 312 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 FAM183BPQ6ZVS7 135 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 ARID3BQ8IVW6 561 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 CMTM8Q8IZV2 173 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 PRELID2Q8N945 189 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 TTC16Q8NEE8 873 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 RSAD2Q8WXG1 361 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 FGF14Q92915 247 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 ASB16Q96NS5 453 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 ERP44Q9BS26 406 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 CYLDQ9NQC7 956 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 NFU1Q9UMS0 254 aa16.24■□□□□ 0.19
SHOX2-202ENST00000425436 ZFP37Q9Y6Q3 630 aaPredicted RBP16.24■□□□□ 0.19
SHOX2-202ENST00000425436 TRAV19A0A0A6YYK7 116 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 MDM4O15151 490 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 COCHO43405 550 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 TLR5O60602 858 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 PRAMEF12O95522 483 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 OAS1P00973 400 aaKnown RBP16.23■□□□□ 0.19
SHOX2-202ENST00000425436 CKMP06732 381 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 ASGR2P07307 311 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 DDX6P26196 483 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHOX2-202ENST00000425436 AVPR1AP37288 418 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 MRPS25P82663 173 aaKnown RBP16.23■□□□□ 0.19
SHOX2-202ENST00000425436 HADHQ16836 314 aaKnown RBP16.23■□□□□ 0.19
SHOX2-202ENST00000425436 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 BTBD8Q5XKL5 378 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 POLNQ7Z5Q5 900 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 ZDHHC14Q8IZN3 488 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 FAM71BQ8TC56 605 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 GRK7Q8WTQ7 553 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 SMARCD2Q92925 531 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 SLCO2A1Q92959 643 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 NCAPGQ9BPX3 1015 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 KXD1Q9BQD3 176 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 CD320Q9NPF0 282 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
SHOX2-202ENST00000425436 CCL26Q9Y258 94 aa16.23■□□□□ 0.19
SHOX2-202ENST00000425436 GOLGA6BA6NDN3 693 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 TTI1O43156 1089 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 OPA1O60313 960 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 HSF2BPO75031 334 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 GRAP2O75791 330 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 KRT7P08729 469 aa16.22■□□□□ 0.19
SHOX2-202ENST00000425436 DESP17661 470 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms