RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 ABCC13Q9NSE7 274 aa18.53■□□□□ 0.56
GPC1-203ENST00000425056 ELOVL2Q9NXB9 296 aa18.53■□□□□ 0.56
GPC1-203ENST00000425056 PCNX2A6NKB5 2137 aa18.53■□□□□ 0.56
GPC1-203ENST00000425056 NDUFS2O75306 463 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 CD44P16070 742 aaKnown RBP18.52■□□□□ 0.56
GPC1-203ENST00000425056 CD6P30203 668 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 ATXN3P54252 364 aaPredicted RBP18.52■□□□□ 0.56
GPC1-203ENST00000425056 SEMA3BQ13214 749 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 BECN1Q14457 450 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 MPPE1Q53F39 396 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 TMEM215Q68D42 235 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 TTI2Q6NXR4 508 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 MSANTD2Q6P1R3 559 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 FOXR2Q6PJQ5 311 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 TMEM270Q6UE05 265 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 PIP4P1Q86T03 277 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 TFAP2BQ92481 460 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 EDEM1Q92611 657 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 FOXJ1Q92949 421 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 NT5C1BQ96P26 610 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 SFMBT1Q9UHJ3 866 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 MAN1B1Q9UKM7 699 aa18.52■□□□□ 0.56
GPC1-203ENST00000425056 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.52■□□□□ 0.56
GPC1-203ENST00000425056 ARHGAP33O14559 1287 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 NCAM1P13591 858 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 PRKCHP24723 683 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 FOXC1Q12948 553 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 CCDC40Q4G0X9 1142 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 SYCP2LQ5T4T6 812 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 LMO3Q8TAP4 145 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 SLC35F5Q8WV83 523 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 ZSWIM1Q9BR11 485 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 GTPBP2Q9BX10 602 aaKnown RBP18.51■□□□□ 0.55
GPC1-203ENST00000425056 CIPCQ9C0C6 399 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 SLC32A1Q9H598 525 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 WSB2Q9NYS7 404 aaPredicted RBP18.51■□□□□ 0.55
GPC1-203ENST00000425056 SUSD2Q9UGT4 822 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 NFE2L3Q9Y4A8 694 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 CFAP47Q6ZTR5 3102 aa18.51■□□□□ 0.55
GPC1-203ENST00000425056 ZFHX4Q86UP3 3567 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 P4HA2O15460 535 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 MSI1O43347 362 aaKnown RBP18.5■□□□□ 0.55
GPC1-203ENST00000425056 TIMM44O43615 452 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 SYNCRIPO60506 623 aaKnown RBP18.5■□□□□ 0.55
GPC1-203ENST00000425056 OPHN1O60890 802 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 GABBR2O75899 941 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 IGLV3-19P01714 112 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 IGLV3-27P01718 113 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 LCP1P13796 627 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 HLA-FP30511 346 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 COPAP53621 1224 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 STILQ15468 1287 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 ADGRF1Q5T601 910 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 PMF1Q6P1K2 205 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 TMPRSS6Q8IU80 811 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 PPM1KQ8N3J5 372 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 HDDC3Q8N4P3 179 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 MINDY1Q8N5J2 469 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 WFIKKN2Q8TEU8 576 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 SORCS1Q8WY21 1168 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 IRGQQ8WZA9 623 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 KAT5Q92993 513 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 TOE1Q96GM8 510 aaKnown RBP18.5■□□□□ 0.55
GPC1-203ENST00000425056 ITM2CQ9NQX7 267 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 PCDHB4Q9Y5E5 795 aa18.5■□□□□ 0.55
GPC1-203ENST00000425056 KCNJ18B7U540 433 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 M0QYV0 167 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 RNF225M0QZC1 329 aaPredicted RBP18.49■□□□□ 0.55
GPC1-203ENST00000425056 SYPP08247 313 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 BMP6P22004 513 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 RGS7P49802 495 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 TPMTP51580 245 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 CETN1Q12798 172 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 CNGA2Q16280 664 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 WDR45BQ5MNZ6 344 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 ISM2Q6H9L7 571 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 SERPINA13PQ6UXR4 307 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 RGL4Q8IZJ4 473 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.49■□□□□ 0.55
GPC1-203ENST00000425056 CADM4Q8NFZ8 388 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 DNASE2BQ8WZ79 361 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 PRCCQ92733 491 aaPredicted RBP18.49■□□□□ 0.55
GPC1-203ENST00000425056 SIPA1Q96FS4 1042 aa18.49■□□□□ 0.55
GPC1-203ENST00000425056 DNAAF2Q9NVR5 837 aaKnown RBP18.49■□□□□ 0.55
GPC1-203ENST00000425056 ASPMQ8IZT6 3477 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 PPP1R3GB7ZBB8 358 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 TSPAN3O60637 253 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 EPHX1P07099 455 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 PROS1P07225 676 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 C7P10643 843 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 GNSP15586 552 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 BRD2P25440 801 aaKnown RBP18.48■□□□□ 0.55
GPC1-203ENST00000425056 GCNT1Q02742 428 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 CAMK2GQ13555 558 aaPredicted RBP18.48■□□□□ 0.55
GPC1-203ENST00000425056 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 UNQ6494/PRO21346Q6UXR6 183 aa18.48■□□□□ 0.55
GPC1-203ENST00000425056 KIAA0907Q7Z7F0 614 aaPredicted RBP18.48■□□□□ 0.55
GPC1-203ENST00000425056 OR2I1PQ8NGU4 316 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms