RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 COX4I2Q96KJ9 171 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF577Q9BSK1 485 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 NACA2Q9H009 215 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 PCDHAC1Q9H158 963 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 COQ10BQ9H8M1 238 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 PLGRKTQ9HBL7 147 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 IGLV3-22A0A075B6J6 115 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 HMX2A2RU54 273 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 CSDE1O75534 798 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 BPGMP07738 259 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 MMP10P09238 476 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 COX4I1P13073 169 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 CKMT2P17540 419 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 UGT1A6P19224 532 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 UGT1A1P22309 533 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 UGT1A4P22310 534 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 IL1R2P27930 398 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ADORA2AP29274 412 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 UGT1A3P35503 534 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 UGT1A5P35504 534 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 GRIA1P42261 906 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 CDKN2BP42772 138 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 FSTL1Q12841 308 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ITGADQ13349 1161 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC9B1Q4ZJI4 515 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RAB6CQ53S08 254 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 LIN9Q5TKA1 542 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 TTC39BQ5VTQ0 682 aaPredicted RBP11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 GPR107Q5VW38 600 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 BSPRYQ5W0U4 402 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 TMEM198Q66K66 360 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC26A11Q86WA9 606 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 C10orf107Q8IVU9 208 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 FAF2Q96CS3 445 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RANBP9Q96S59 729 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 CGREF1Q99674 301 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC29A1Q99808 456 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RAB6CQ9H0N0 254 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 PPCSQ9HAB8 311 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 TRPC7Q9HCX4 862 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 RAB6BQ9NRW1 208 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 SIRPGQ9P1W8 387 aa11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ZC3H7BQ9UGR2 993 aaKnown RBP11.63□□□□□ -0.55
SEC61A1-202ENST00000424880 ARHGEF37A1IGU5 675 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SNRPAP09012 282 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SHMT1P34896 483 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 GRM5P41594 1212 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ACOT2P49753 483 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 NME3Q13232 169 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 GPATCH4Q5T3I0 446 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 IL23RQ5VWK5 629 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 PLEKHA7Q6IQ23 1121 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 CYP2R1Q6VVX0 501 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 DCDC5Q6ZRR9 648 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 AHI1Q8N157 1196 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 NLGN1Q8N2Q7 840 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 NETO2Q8NC67 525 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 MAPK15Q8TD08 544 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 NACC1Q96RE7 527 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 AMNQ9BXJ7 453 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ZFYVE28Q9HCC9 887 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 MAGED2Q9UNF1 606 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 WDR64B1ANS9 1081 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 PPEF1O14829 653 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 KRT37O76014 449 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 NAT1P18440 290 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SREBF1P36956 1147 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 GTF2IP78347 998 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 DPYSL3Q14195 570 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 N4BP2L1Q5TBK1 243 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SNX32Q86XE0 403 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 MBOAT7Q96N66 472 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 BIRC8Q96P09 236 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ACCSQ96QU6 501 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 OR52B2Q96RD2 323 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 C1orf112Q9NSG2 853 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 THEGQ9P2T0 379 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 LTBP1Q14766 1721 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 IPO5O00410 1097 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 GIPC1O14908 333 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 CASQ2O14958 399 aaPredicted RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 SLC26A4O43511 780 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 PSMD10O75832 226 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 P4HBP07237 508 aaKnown RBP11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ARSAP15289 507 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 DPP6P42658 865 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 BCAP31P51572 246 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 C21orf59P57076 290 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 TSPY1Q01534 308 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ORC1Q13415 861 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 ADGRE1Q14246 886 aa11.62□□□□□ -0.55
SEC61A1-202ENST00000424880 TEDDM1Q5T9Z0 273 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms