RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 RRN3Q9NYV6 651 aa19.43■□□□□ 0.7
PRNP-202ENST00000424424 SLC12A6Q9UHW9 1150 aa19.43■□□□□ 0.7
PRNP-202ENST00000424424 FBXO10Q9UK96 956 aa19.43■□□□□ 0.7
PRNP-202ENST00000424424 MMP17Q9ULZ9 603 aa19.43■□□□□ 0.7
PRNP-202ENST00000424424 MYO18AQ92614 2054 aaKnown RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 CCDC163A0A0D9SF12 145 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 A0A1W2PQC6 194 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 TYW5A2RUC4 315 aaKnown RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 TRIM24O15164 1050 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 GFRA3O60609 400 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 TSPAN3O60637 253 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 LILRB5O75023 590 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 DAB1O75553 588 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 LMNAP02545 664 aaKnown RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 CISD3P0C7P0 127 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 SLC2A3P11169 496 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 FERP16591 822 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 CNR2P34972 360 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 SCNN1AP37088 669 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 KIR2DL1P43626 348 aaPredicted RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 FNTBP49356 437 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 NOMO3P69849 1222 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 E2F5Q15329 346 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 EOGTQ5NDL2 527 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 EMC10Q5UCC4 262 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 NAA35Q5VZE5 725 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 SFTPA1Q8IWL2 248 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 CCDC33Q8N5R6 958 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 ALLCQ8N6M5 410 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 ZNF513Q8N8E2 541 aaPredicted RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 ATP6V0D2Q8N8Y2 350 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 TXNDC5Q8NBS9 432 aaKnown RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
PRNP-202ENST00000424424 STAP1Q9ULZ2 295 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 MYO6Q9UM54 1294 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 SLC27A6Q9Y2P4 619 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 STARD13Q9Y3M8 1113 aa19.42■□□□□ 0.7
PRNP-202ENST00000424424 PRR23AA6NEV1 266 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 KLF8O95600 359 aaPredicted RBP19.41■□□□□ 0.7
PRNP-202ENST00000424424 IGLV3-25P01717 112 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 CYP1A1P04798 512 aaPredicted RBP19.41■□□□□ 0.7
PRNP-202ENST00000424424 RNASE9P60153 205 aaKnown RBP19.41■□□□□ 0.7
PRNP-202ENST00000424424 FANCCQ00597 558 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 FMO1Q01740 532 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 MTA1Q13330 715 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 NR1I3Q14994 352 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 FAM102AQ5T9C2 384 aaPredicted RBP19.41■□□□□ 0.7
PRNP-202ENST00000424424 SDE2Q6IQ49 451 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 WDR5BQ86VZ2 330 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 XYLT1Q86Y38 959 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 IL17RCQ8NAC3 791 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 RNF34Q969K3 372 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 HHIPQ96QV1 700 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 DDIT4Q9NX09 232 aa19.41■□□□□ 0.7
PRNP-202ENST00000424424 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRNP-202ENST00000424424 SYNJ2BP-COX16A0A087WUM0 186 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 APBB3O95704 486 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 MOCS2O96007 188 aaPredicted RBP19.4■□□□□ 0.7
PRNP-202ENST00000424424 CHRNB2P17787 502 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 ABCB4P21439 1286 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 CCR1P32246 355 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 MATKP42679 507 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 DGKEP52429 567 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 UBASH3AP57075 661 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 DMWDQ09019 674 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 ZC3H12AQ5D1E8 599 aaKnown RBP19.4■□□□□ 0.7
PRNP-202ENST00000424424 MPP7Q5T2T1 576 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 PIK3R6Q5UE93 754 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 ZNF557Q8N988 423 aaPredicted RBP19.4■□□□□ 0.7
PRNP-202ENST00000424424 TSTD1Q8NFU3 115 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 UCMAQ8WVF2 138 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 BTN2A3PQ96KV6 586 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 POLMQ9NP87 494 aaPredicted RBP19.4■□□□□ 0.7
PRNP-202ENST00000424424 SEPT11Q9NVA2 429 aaKnown RBP19.4■□□□□ 0.7
PRNP-202ENST00000424424 TMEM51Q9NW97 253 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 COX16Q9P0S2 106 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 RAB23Q9ULC3 237 aa19.4■□□□□ 0.7
PRNP-202ENST00000424424 GOLGA6L7A0A1B0GV03 622 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 ANTXRLA6NF34 631 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 PRRT4C9JH25 899 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 M0QYT0 321 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 ALDH1A2O94788 518 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 HOXD9P28356 352 aaPredicted RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 NSFP46459 744 aaKnown RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 PITX1P78337 314 aaPredicted RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 NME3Q13232 169 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 CRY1Q16526 586 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 FAM133BQ5BKY9 247 aaKnown RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 RFWD3Q6PCD5 774 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 SND1Q7KZF4 910 aaKnown RBP eCLIP19.39■□□□□ 0.692e-14■■■■□ 26.6
PRNP-202ENST00000424424 ASCL5Q7RTU5 278 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 ANKS1BQ7Z6G8 1248 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 CCDC117Q8IWD4 279 aaPredicted RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 HJURPQ8NCD3 748 aaPredicted RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 AGPAT1Q99943 283 aa19.39■□□□□ 0.69
PRNP-202ENST00000424424 POLR3BQ9NW08 1133 aaPredicted RBP19.39■□□□□ 0.69
PRNP-202ENST00000424424 FAM170AA1A519 330 aa19.38■□□□□ 0.69
PRNP-202ENST00000424424 KCNU1A8MYU2 1149 aa19.38■□□□□ 0.69
PRNP-202ENST00000424424 GOLGA8SH3BPF8 625 aa19.38■□□□□ 0.69
PRNP-202ENST00000424424 SGK1O00141 431 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms