RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 BAG2O95816 211 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 PROCP04070 461 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 MCF2P10911 925 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 VCLP18206 1134 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 SLC26A2P50443 739 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 DGKZQ13574 1117 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
C9orf3-204ENST00000424143 CCDC153Q494R4 210 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 ANKRD20A4Q4UJ75 823 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 PKDCCQ504Y2 493 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 RASIP1Q5U651 963 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 LRRC8BQ6P9F7 803 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 TMEM110Q86TL2 294 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 KBTBD6Q86V97 674 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 IFNLR1Q8IU57 520 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-204ENST00000424143 MARVELD2Q8N4S9 558 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 TAB3Q8N5C8 712 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-204ENST00000424143 CATSPER1Q8NEC5 780 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 CENPIQ92674 756 aaPredicted RBP15.69■□□□□ 0.1
C9orf3-204ENST00000424143 CLPTM1LQ96KA5 538 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 TWNKQ96RR1 684 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 EBF4Q9BQW3 602 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 BCAP29Q9UHQ4 241 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 CDH22Q9UJ99 828 aa15.69■□□□□ 0.1
C9orf3-204ENST00000424143 TMEM114B3SHH9 223 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 GPR25O00155 361 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 UGT1A9O60656 530 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CAPNS1P04632 268 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PTPRAP18433 802 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 NRLP54845 237 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 MTTPP55157 894 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CXCL9Q07325 125 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 BMPR2Q13873 1038 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 OGFRL1Q5TC84 451 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 MROH9Q5TGP6 573 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 DPY19L2Q6NUT2 758 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 TRMT10BQ6PF06 316 aaKnown RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PACS1Q6VY07 963 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 FAM183BPQ6ZVS7 135 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PSTKQ8IV42 348 aaKnown RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 FBXW8Q8N3Y1 598 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 DRAXINQ8NBI3 349 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 RNF149Q8NC42 400 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 GSTCDQ8NEC7 633 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 C11orf84Q9BUA3 381 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CDT1Q9H211 546 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 EBF3Q9H4W6 596 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 ZNF395Q9H8N7 513 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 UGT1A7Q9HAW7 530 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 UGT1A10Q9HAW8 530 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 UGT1A8Q9HAW9 530 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CDY2AQ9Y6F7 541 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 DGKIO75912 1065 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 METTL18O95568 372 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PGAM1P18669 254 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 MX2P20592 715 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SDC4P31431 198 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 RAP1GAPP47736 663 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PRKAA2P54646 552 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CDH8P55286 799 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 ABCE1P61221 599 aaKnown RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SLC6A3Q01959 620 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CREB5Q02930 508 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 MSLNQ13421 630 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PCLAFQ15004 111 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 N4BP2L1Q5TBK1 243 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 OR6B2Q6IFH4 312 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 ZFP1Q6P2D0 407 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 OLFML1Q6UWY5 402 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 CNDP1Q96KN2 507 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SORT1Q99523 831 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SNRNP25Q9BV90 132 aaKnown RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SMYD3Q9H7B4 428 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PICK1Q9NRD5 415 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PRMT7Q9NVM4 692 aaPredicted RBP15.68■□□□□ 0.1
C9orf3-204ENST00000424143 ARHGAP26Q9UNA1 814 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 POMPQ9Y244 141 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 PCDHB12Q9Y5F1 795 aa15.68■□□□□ 0.1
C9orf3-204ENST00000424143 SF3B1O75533 1304 aaKnown RBP eCLIP15.67■□□□□ 0.16e-6■■■■■ 103.6
C9orf3-204ENST00000424143 MGAMO43451 1857 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 A0A0A0MRY4 1105 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 ARHGAP42A6NI28 874 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 ZBTB42B2RXF5 422 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 AP1G2O75843 785 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 ALDOAP04075 364 aaKnown RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 PFKMP08237 780 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 CYP2C8P10632 490 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 CYP2F1P24903 491 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 DNAJB1P25685 340 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 GARSP41250 739 aaKnown RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 CHN2P52757 468 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 MTM1Q13496 603 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 PDE1CQ14123 709 aaPredicted RBP15.67■□□□□ 0.1
C9orf3-204ENST00000424143 SFT2D3Q587I9 215 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 SH3D19Q5HYK7 790 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 GRTP1Q5TC63 336 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 UGT2A3Q6UWM9 527 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 RNF111Q6ZNA4 994 aa15.67■□□□□ 0.1
C9orf3-204ENST00000424143 RAPH1Q70E73 1250 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms