RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 PDK2Q15119 407 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 ACBD5Q5T8D3 534 aaPredicted RBP16.55■□□□□ 0.24
ABCA1-203ENST00000423487 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCA1-203ENST00000423487 MAP7D3Q8IWC1 876 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 RCOR2Q8IZ40 523 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 KCTD6Q8NC69 237 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 PBKQ96KB5 322 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 ZFRQ96KR1 1074 aaKnown RBP16.55■□□□□ 0.24
ABCA1-203ENST00000423487 BTN2A3PQ96KV6 586 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 HAPLN3Q96S86 360 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 PSMB7Q99436 277 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 DCLK3Q9C098 648 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 DHX35Q9H5Z1 703 aaKnown RBP16.55■□□□□ 0.24
ABCA1-203ENST00000423487 GKN1Q9NS71 199 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 ARHGAP26Q9UNA1 814 aa16.55■□□□□ 0.24
ABCA1-203ENST00000423487 CDH23Q9H251 3354 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 LRRD1A4D1F6 860 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 STC2O76061 302 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 MOCS2O96007 188 aaPredicted RBP16.54■□□□□ 0.24
ABCA1-203ENST00000423487 KCNQ1P51787 676 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 CDH6P55285 790 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 KRT81Q14533 505 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 DPYSL2Q16555 572 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 SMRP1Q8NCR6 262 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 NECTIN4Q96NY8 510 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 OSBPL9Q96SU4 736 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 OSBPL2Q9H1P3 480 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 ANLNQ9NQW6 1124 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 KLHL11Q9NVR0 708 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 GPATCH2LQ9NWQ4 482 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 MTMR10Q9NXD2 777 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 GDE1Q9NZC3 331 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 CD207Q9UJ71 328 aa16.54■□□□□ 0.24
ABCA1-203ENST00000423487 LSM7Q9UK45 103 aaKnown RBP16.54■□□□□ 0.24
ABCA1-203ENST00000423487 ANAPC1Q9H1A4 1944 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CES2O00748 559 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 PAGE1O75459 146 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 IRF1P10914 325 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 KDELR1P24390 212 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 WEE1P30291 646 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 SLC11A2P49281 568 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 ZNF135P52742 658 aaPredicted RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 COPS2P61201 443 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 AMPD2Q01433 879 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CCDC85BQ15834 202 aaPredicted RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CA9Q16790 459 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 SEL1L2Q5TEA6 688 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 GET4Q7L5D6 327 aaPredicted RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CCDC50Q8IVM0 306 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 RAPGEF5Q92565 580 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 FGF13Q92913 245 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 AZIN2Q96A70 460 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 ACSF2Q96CM8 615 aaPredicted RBP16.53■□□□□ 0.24
ABCA1-203ENST00000423487 TMPRSS4Q9NRS4 437 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 TDP1Q9NUW8 608 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 CDH22Q9UJ99 828 aa16.53■□□□□ 0.24
ABCA1-203ENST00000423487 NOTCH4Q99466 2003 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 OBSL1O75147 1896 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 I6L893 689 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 LATS1O95835 1130 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 PYGMP11217 842 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 CORO1AP31146 461 aaKnown RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 L1CAMP32004 1257 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 CXCR5P32302 372 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 ARSEP51690 589 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 PPP6R3Q5H9R7 873 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 DCAF12L1Q5VU92 463 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 VSIG1Q86XK7 387 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 ARID3BQ8IVW6 561 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 ZSCAN18Q8TBC5 510 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 FAM71BQ8TC56 605 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 USP13Q92995 863 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 RNF25Q96BH1 459 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 C1orf74Q96LT6 269 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 ZSWIM3Q96MP5 696 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 UBE2ZQ9H832 354 aaPredicted RBP16.52■□□□□ 0.24
ABCA1-203ENST00000423487 KIF9Q9HAQ2 790 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 PCDH18Q9HCL0 1135 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 CDH7Q9ULB5 785 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 ZNF510Q9Y2H8 683 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 SH3BP1Q9Y3L3 701 aa16.52■□□□□ 0.24
ABCA1-203ENST00000423487 DOCK6Q96HP0 2047 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.51■□□□□ 0.23
ABCA1-203ENST00000423487 PI4K2BG5E9Z4 385 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 LEFTY2O00292 366 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 CEP104O60308 925 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 ACSL4O60488 711 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 URI1O94763 535 aaPredicted RBP16.51■□□□□ 0.23
ABCA1-203ENST00000423487 TCF3P15923 654 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 ARL4AP40617 200 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 MLLT6P55198 1093 aaPredicted RBP16.51■□□□□ 0.23
ABCA1-203ENST00000423487 ZNF211Q13398 564 aaPredicted RBP16.51■□□□□ 0.23
ABCA1-203ENST00000423487 TUBB2AQ13885 445 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 CLUL1Q15846 466 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 SPOCD1Q6ZMY3 1216 aa16.51■□□□□ 0.23
ABCA1-203ENST00000423487 DENND1CQ8IV53 801 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms