RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 RGL4Q8IZJ4 473 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 SCML4Q8N228 414 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 PPM1KQ8N3J5 372 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 TFAP2BQ92481 460 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 ZNF419Q96HQ0 510 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-206ENST00000423161 MKRN2Q9H000 416 aaKnown RBP19.3■□□□□ 0.68
SREBF1-206ENST00000423161 SLC32A1Q9H598 525 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 CNGB3Q9NQW8 809 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 ABCC13Q9NSE7 274 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 MAN1B1Q9UKM7 699 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 PCDHB4Q9Y5E5 795 aa19.3■□□□□ 0.68
SREBF1-206ENST00000423161 PMM2O15305 246 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 MSI1O43347 362 aaKnown RBP19.29■□□□□ 0.68
SREBF1-206ENST00000423161 SYNCRIPO60506 623 aaKnown RBP19.29■□□□□ 0.68
SREBF1-206ENST00000423161 TSPAN3O60637 253 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 HOXD9P28356 352 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-206ENST00000423161 PPP1R2P41236 205 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 RGS7P49802 495 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 DAOAP59103 153 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 ARID5AQ03989 594 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 NUMA1Q14980 2115 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 SYCP2LQ5T4T6 812 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 KLHL10Q6JEL2 608 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 HDDC3Q8N4P3 179 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 MINDY1Q8N5J2 469 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 RBBP8NLQ8NC74 664 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-206ENST00000423161 SORCS1Q8WY21 1168 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 FOXJ1Q92949 421 aa19.29■□□□□ 0.68
SREBF1-206ENST00000423161 USP36Q9P275 1121 aaKnown RBP19.29■□□□□ 0.68
SREBF1-206ENST00000423161 M0QYV0 167 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 ARHGAP33O14559 1287 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 OPHN1O60890 802 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 PRKCHP24723 683 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 ZNF445P59923 1031 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 SEMA3BQ13214 749 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 WDR45BQ5MNZ6 344 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 TMEM215Q68D42 235 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 PMF1Q6P1K2 205 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 SERPINA13PQ6UXR4 307 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 TMPRSS6Q8IU80 811 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 OR2I1PQ8NGU4 316 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 KAT5Q92993 513 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 SIPA1Q96FS4 1042 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 TOE1Q96GM8 510 aaKnown RBP19.28■□□□□ 0.68
SREBF1-206ENST00000423161 WSB2Q9NYS7 404 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-206ENST00000423161 SUSD2Q9UGT4 822 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 STOML2Q9UJZ1 356 aa19.28■□□□□ 0.68
SREBF1-206ENST00000423161 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.28■□□□□ 0.68
SREBF1-206ENST00000423161 MEI4A8MW99 385 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 UPK3BL1B0FP48 263 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 UPK3BL2E5RIL1 263 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 PIK3R2O00459 728 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 GABBR2O75899 941 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 LATS1O95835 1130 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 EPHX1P07099 455 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 SYPP08247 313 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 NCAM1P13591 858 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 SPINK2P20155 84 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 BRD2P25440 801 aaKnown RBP19.27■□□□□ 0.68
SREBF1-206ENST00000423161 CETN1Q12798 172 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 STILQ15468 1287 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 CNGA2Q16280 664 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 PLEKHG6Q3KR16 790 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 ADGRF1Q5T601 910 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 TTI2Q6NXR4 508 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 MSANTD2Q6P1R3 559 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 PIP4P1Q86T03 277 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 CACUL1Q86Y37 369 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 ELOA2Q8IYF1 753 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-206ENST00000423161 SLC35F5Q8WV83 523 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 NELFBQ8WX92 580 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 PRCCQ92733 491 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-206ENST00000423161 TMA16Q96EY4 203 aaKnown RBP19.27■□□□□ 0.68
SREBF1-206ENST00000423161 ZSWIM1Q9BR11 485 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 GPR174Q9BXC1 333 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 ITM2CQ9NQX7 267 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 WASF3Q9UPY6 502 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 CTNND2Q9UQB3 1225 aa19.27■□□□□ 0.68
SREBF1-206ENST00000423161 BICDL2A1A5D9 508 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 RNF225M0QZC1 329 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-206ENST00000423161 P4HA2O15460 535 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 TIMM44O43615 452 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 CALCAP01258 141 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 LTFP02788 710 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 ACADMP11310 421 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 GNSP15586 552 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 MAOBP27338 520 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 HLA-FP30511 346 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 TPMTP51580 245 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 COPAP53621 1224 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 WFIKKN2Q8TEU8 576 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 IRGQQ8WZA9 623 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 ABCB8Q9NUT2 735 aa19.26■□□□□ 0.67
SREBF1-206ENST00000423161 PPP1R3GB7ZBB8 358 aa19.25■□□□□ 0.67
SREBF1-206ENST00000423161 TOP3BO95985 862 aaKnown RBP19.25■□□□□ 0.67
SREBF1-206ENST00000423161 HLA-EP13747 358 aa19.25■□□□□ 0.67
SREBF1-206ENST00000423161 BMP6P22004 513 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms