RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 NOMO3P69849 1222 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 CDR2Q01850 454 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 SLC6A3Q01959 620 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 ZSCAN23Q3MJ62 389 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 FILIP1LQ4L180 1135 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 DCAF6Q58WW2 860 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 ZDHHC17Q8IUH5 632 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 DEFB106AQ8N104 65 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 ZNF513Q8N8E2 541 aaPredicted RBP27.46■■□□□ 1.99
CDK9-202ENST00000421939 SUMF1Q8NBK3 374 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 KCNV2Q8TDN2 545 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 AZIN2Q96A70 460 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 CBX8Q9HC52 389 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 ZDHHC4Q9NPG8 344 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 SMG5Q9UPR3 1016 aaKnown RBP27.46■■□□□ 1.99
CDK9-202ENST00000421939 SLC27A6Q9Y2P4 619 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 STARD13Q9Y3M8 1113 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 FAM186AA6NE01 2351 aa27.46■■□□□ 1.99
CDK9-202ENST00000421939 CCDC163A0A0D9SF12 145 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 TEX33O43247 280 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 ACSL4O60488 711 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 TSPAN3O60637 253 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 PITX1P78337 314 aaPredicted RBP27.45■■□□□ 1.98
CDK9-202ENST00000421939 CDK17Q00537 523 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 NAA35Q5VZE5 725 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 TRMT11Q7Z4G4 463 aaKnown RBP27.45■■□□□ 1.98
CDK9-202ENST00000421939 MSANTD4Q8NCY6 345 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 ZNF397Q8NF99 534 aaPredicted RBP27.45■■□□□ 1.98
CDK9-202ENST00000421939 FAM204AQ9H8W3 233 aa27.45■■□□□ 1.98
CDK9-202ENST00000421939 OTOGLQ3ZCN5 2332 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 PRRT4C9JH25 899 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 SGK1O00141 431 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 DAB1O75553 588 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 APOEP02649 317 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 HOXD9P28356 352 aaPredicted RBP27.44■■□□□ 1.98
CDK9-202ENST00000421939 CNR2P34972 360 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 GABRB2P47870 512 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 CRY1Q16526 586 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 FAM133BQ5BKY9 247 aaKnown RBP27.44■■□□□ 1.98
CDK9-202ENST00000421939 EOGTQ5NDL2 527 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 ERICH1Q86X53 443 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 TSTD1Q8NFU3 115 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 C18orf8Q96DM3 657 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 SLC2A11Q9BYW1 496 aa27.44■■□□□ 1.98
CDK9-202ENST00000421939 FAM170AA1A519 330 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 CAVIN2O95810 425 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 MOCS2O96007 188 aaPredicted RBP27.43■■□□□ 1.98
CDK9-202ENST00000421939 DGKEP52429 567 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 TPM4P67936 248 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 FMO1Q01740 532 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 EGFLAMQ63HQ2 1017 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 NADSYN1Q6IA69 706 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 CACNA2D4Q7Z3S7 1137 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 LUZP1Q86V48 1076 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 CPA5Q8WXQ8 436 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 TMA16Q96EY4 203 aaKnown RBP27.43■■□□□ 1.98
CDK9-202ENST00000421939 DDX50Q9BQ39 737 aaKnown RBP27.43■■□□□ 1.98
CDK9-202ENST00000421939 IRX2Q9BZI1 471 aaPredicted RBP27.43■■□□□ 1.98
CDK9-202ENST00000421939 DDIT4Q9NX09 232 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 HCN2Q9UL51 889 aa27.43■■□□□ 1.98
CDK9-202ENST00000421939 GVINP1Q7Z2Y8 2422 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 A0A1B0GTH6 734 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 GOLGA6L7A0A1B0GV03 622 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 AXIN1O15169 862 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 HRO43593 1189 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 ADAM23O75077 832 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 CHRNB2P17787 502 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 SLC6A4P31645 630 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 SCNN1AP37088 669 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 SGSHP51688 502 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 SRSF5Q13243 272 aaKnown RBP27.42■■□□□ 1.98
CDK9-202ENST00000421939 EIF4EBP2Q13542 120 aaPredicted RBP27.42■■□□□ 1.98
CDK9-202ENST00000421939 ZC3H12AQ5D1E8 599 aaKnown RBP27.42■■□□□ 1.98
CDK9-202ENST00000421939 PIK3R6Q5UE93 754 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 RFWD3Q6PCD5 774 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 TRIM72Q6ZMU5 477 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 ANKS1BQ7Z6G8 1248 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 XYLT1Q86Y38 959 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 CLEC4EQ9ULY5 219 aa27.42■■□□□ 1.98
CDK9-202ENST00000421939 EP300Q09472 2414 aaPredicted RBP27.42■■□□□ 1.98
CDK9-202ENST00000421939 MYO18AQ92614 2054 aaKnown RBP27.42■■□□□ 1.98
CDK9-202ENST00000421939 SERPINC1P01008 464 aa27.41■■□□□ 1.98
CDK9-202ENST00000421939 CYP1A1P04798 512 aaPredicted RBP27.41■■□□□ 1.98
CDK9-202ENST00000421939 HNRNPLP14866 589 aaKnown RBP eCLIP27.41■■□□□ 1.98
CDK9-202ENST00000421939 ARID5AQ03989 594 aa27.41■■□□□ 1.98
CDK9-202ENST00000421939 GEN1Q17RS7 908 aa27.41■■□□□ 1.98
CDK9-202ENST00000421939 FAM102AQ5T9C2 384 aaPredicted RBP27.41■■□□□ 1.98
CDK9-202ENST00000421939 TMEM92Q6UXU6 159 aa27.41■■□□□ 1.98
CDK9-202ENST00000421939 PRICKLE1Q96MT3 831 aaPredicted RBP27.41■■□□□ 1.98
CDK9-202ENST00000421939 EBF1Q9UH73 591 aa27.41■■□□□ 1.98
CDK9-202ENST00000421939 NTSR1P30989 418 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 GBP1P32455 592 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 NOS2P35228 1153 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 SIM2Q14190 667 aaPredicted RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 C2CD6Q53TS8 623 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 MPP7Q5T2T1 576 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 ANO7Q6IWH7 933 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 PRR23BQ6ZRT6 265 aa27.4■■□□□ 1.98
CDK9-202ENST00000421939 HJURPQ8NCD3 748 aaPredicted RBP27.4■■□□□ 1.98
CDK9-202ENST00000421939 GAB3Q8WWW8 586 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms