RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 STARD13Q9Y3M8 1113 aa13.78□□□□□ -0.2
MCF2L-213ENST00000421756 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 CFAP73A6NFT4 308 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 EPHB1P54762 984 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 ZNF792Q3KQV3 632 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 ANKRD20A2Q5SQ80 823 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 ANKRD20A1Q5TYW2 823 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 SLC44A1Q8WWI5 657 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 E2F7Q96AV8 911 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.2
MCF2L-213ENST00000421756 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 B2RBV5 119 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 NEMP1O14524 444 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 PRPF4O43172 522 aaKnown RBP eCLIP13.77□□□□□ -0.212e-6■■■□□ 15.1
MCF2L-213ENST00000421756 GSTA1P08263 222 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 TFB1MQ8WVM0 346 aaKnown RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 HTR3CQ8WXA8 447 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 P2RY11Q96G91 374 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 FLRT1Q9NZU1 646 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 FCHO1O14526 889 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 APOEP02649 317 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 CACNA2D1P54289 1103 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 SLC8A3P57103 927 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 BST2Q10589 180 aaKnown RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 ZNF669Q96BR6 464 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-213ENST00000421756 AGAP2Q99490 1192 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 PTPN18Q99952 460 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 SENP1Q9P0U3 644 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 C2CD2Q9Y426 696 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 LTBP3Q9NS15 1303 aa13.77□□□□□ -0.21
MCF2L-213ENST00000421756 TRIP12Q14669 1992 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GOLGA8QA0A0J9YX86 632 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GOLGA8OA6NCC3 632 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 E7ENQ6 273 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GOLGA8NF8WBI6 632 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 DFFAO00273 331 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 MGAMO43451 1857 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 AP1G2O75843 785 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 TYK2P29597 1187 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GRM5P41594 1212 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 SNX17Q15036 470 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 TTC39BQ5VTQ0 682 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 CES4AQ5XG92 561 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 RNF43Q68DV7 783 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 KBTBD7Q8WVZ9 684 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 APOPT1Q96IL0 206 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 RSRC1Q96IZ7 334 aaKnown RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 TTC1Q99614 292 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 THTPAQ9BU02 230 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ARHGEF3Q9NR81 526 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 PIGVQ9NUD9 493 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 NOP53Q9NZM5 478 aaKnown RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ZFATQ9P243 1243 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ARID2Q68CP9 1835 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 TPP1O14773 563 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 TAF6P49848 677 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 LILRA4P59901 499 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 RASA2Q15283 850 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 DUSP28Q4G0W2 176 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 PREPLQ4J6C6 727 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 HSP90AA5PQ58FG0 334 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GNASQ5JWF2 1037 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 B3GALNT2Q8NCR0 500 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 CFAP61Q8NHU2 1237 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GPR152Q8TDT2 470 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 SLC7A6OSQ96CW6 309 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 SNX27Q96L92 541 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 IPPQ9Y573 584 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ITM2AO43736 263 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 KRT36O76013 467 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ELF1P32519 619 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 SCNN1GP51170 649 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ARPP19P56211 112 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 KHDC1Q4VXA5 237 aaKnown RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 CERCAMQ5T4B2 595 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 N4BP2L1Q5TBK1 243 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-213ENST00000421756 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 MIPEPQ99797 713 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 CXorf56Q9H5V9 222 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 ACTL7BQ9Y614 415 aa13.76□□□□□ -0.21
MCF2L-213ENST00000421756 PAPPA2Q9BXP8 1791 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MSX2P35548 267 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-213ENST00000421756 BRCC3P46736 316 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 BCAT1P54687 386 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 MFSD10Q14728 455 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 NCBP2-AS2Q69YL0 99 aa13.75□□□□□ -0.21
MCF2L-213ENST00000421756 RAPH1Q70E73 1250 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms