RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 MOCS2O96007 188 aaPredicted RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 SLC2A3P11169 496 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 PDGFRAP16234 1089 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 AOC1P19801 751 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 CDC25BP30305 580 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 RFC1P35251 1148 aaPredicted RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 OPRD1P41143 372 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 CLCN5P51795 746 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 PON2Q15165 354 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 ASTE1Q2TB18 679 aaPredicted RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 ANO4Q32M45 955 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 PPP1R15BQ5SWA1 713 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 NAIF1Q69YI7 327 aaPredicted RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 PLEKHA7Q6IQ23 1121 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 ALKBH5Q6P6C2 394 aaKnown RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 SUGP1Q8IWZ8 645 aaKnown RBP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 ZNF687Q8N1G0 1237 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 RNF34Q969K3 372 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 ZNF653Q96CK0 615 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 CHP1Q99653 195 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 LRFN3Q9BTN0 628 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 BBS2Q9BXC9 721 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 OSBPL6Q9BZF3 934 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 PIGVQ9NUD9 493 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 TMEM51Q9NW97 253 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 NENFQ9UMX5 172 aa21.44■■□□□ 1.02
HMGXB4-203ENST00000420166 NEDD8-MDP1E9PL57 170 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 F9P00740 461 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 MYBL1P10243 752 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 SDC4P31431 198 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 CCR1P32246 355 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 PTPN9P43378 593 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 DEUP1Q05D60 604 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 MAMLD1Q13495 774 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 PPP2R5DQ14738 602 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 SLC18A3Q16572 532 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 NADSYN1Q6IA69 706 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 BNIPLQ7Z465 357 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 C12orf40Q86WS4 652 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 CCDC105Q8IYK2 499 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 ATP6V0D2Q8N8Y2 350 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 BTN2A3PQ96KV6 586 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 MCEEQ96PE7 176 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 P2RY13Q9BPV8 354 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 DEF6Q9H4E7 631 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 PARVAQ9NVD7 372 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 CNOT8Q9UFF9 292 aaKnown RBP21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 XPO7Q9UIA9 1087 aaKnown RBP21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 SIT1Q9Y3P8 196 aa21.43■■□□□ 1.02
HMGXB4-203ENST00000420166 ANKRD62A6NC57 917 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 KCNU1A8MYU2 1149 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 GFRA2O00451 464 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 TYRP14679 529 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 GPD1P21695 349 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 EIF2DP41214 584 aaKnown RBP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 CXCR3P49682 368 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 RPL7AP62424 266 aaKnown RBP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 ATP11AP98196 1134 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 GFPT1Q06210 699 aaPredicted RBP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 CCDC14Q49A88 953 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 FAM133BQ5BKY9 247 aaKnown RBP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 TMEM196Q5HYL7 178 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 CCDC122Q5T0U0 273 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 SND1Q7KZF4 910 aaKnown RBP eCLIP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 ETFBKMTQ8IXQ9 262 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 CD101Q93033 1021 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 EXOC4Q96A65 974 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 P2RY11Q96G91 374 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 DDX50Q9BQ39 737 aaKnown RBP21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 SLC12A6Q9UHW9 1150 aa21.42■■□□□ 1.02
HMGXB4-203ENST00000420166 ATG2BQ96BY7 2078 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 GOLGA6L7A0A1B0GV03 622 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 PI15O43692 258 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 AKR1B10O60218 316 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 CACNG3O60359 315 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 ENDOD1O94919 500 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 PENKP01210 267 aaPredicted RBP21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 CYBBP04839 570 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 ABCB4P21439 1286 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 SLC6A4P31645 630 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 RDXP35241 583 aaKnown RBP21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 GALK1P51570 392 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 C15orf59Q2T9L4 293 aaPredicted RBP21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 BRMS1LQ5PSV4 323 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 FYB2Q5VWT5 728 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 RFWD3Q6PCD5 774 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 DCUN1D2Q6PH85 259 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 BHMTQ93088 406 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 CCDC42Q96M95 316 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 PANX2Q96RD6 677 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 NHEJ1Q9H9Q4 299 aaPredicted RBP21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 PAXBP1Q9Y5B6 917 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 SCINQ9Y6U3 715 aa21.41■■□□□ 1.02
HMGXB4-203ENST00000420166 NCAM2O15394 837 aa21.4■■□□□ 1.02
HMGXB4-203ENST00000420166 TSPAN3O60637 253 aa21.4■■□□□ 1.02
HMGXB4-203ENST00000420166 SLC6A11P48066 632 aa21.4■■□□□ 1.02
HMGXB4-203ENST00000420166 ZNF143P52747 638 aaPredicted RBP21.4■■□□□ 1.02
HMGXB4-203ENST00000420166 ATXN1P54253 815 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms