RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 UGT1A8Q9HAW9 530 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 CLK4Q9HAZ1 481 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SMYD2Q9NRG4 433 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 HOMER2Q9NSB8 354 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 PNPOQ9NVS9 261 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 GNPTGQ9UJJ9 305 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC8A2Q9UPR5 921 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 GIT1Q9Y2X7 761 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 PTPN1P18031 435 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 MMP8P22894 467 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 NUDT2P50583 147 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 OGDHQ02218 1023 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 PICALMQ13492 652 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 DPYSQ14117 519 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 NRF1Q16656 503 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 CEP55Q53EZ4 464 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 KRT80Q6KB66 452 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 ATG14Q6ZNE5 492 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 USP37Q86T82 979 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 FIBCD1Q8N539 461 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 PDCD6IPQ8WUM4 868 aaKnown RBP8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 STARD8Q92502 1023 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 PLAC1Q9HBJ0 212 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 POPDC2Q9HBU9 364 aa8.26□□□□□ -1.09
HMGXB4-202ENST00000418170 ESRRBO95718 433 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SERPINE1P05121 402 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CSH1P0DML2 217 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CSH2P0DML3 217 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A6P19224 532 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A1P22309 533 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A4P22310 534 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 PAX3P23760 479 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 GABRB3P28472 473 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SSTR3P32745 418 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A3P35503 534 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 UGT1A5P35504 534 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SNAP25P60880 206 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 RPL10AP62906 217 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 YWHAZP63104 245 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 PIGHQ14442 188 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 C16orf87Q6PH81 154 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 POLNQ7Z5Q5 900 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 GJD4Q96KN9 370 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 MCEEQ96PE7 176 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ZC3H7BQ9UGR2 993 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CDC14AQ9UNH5 594 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SMCHD1A6NHR9 2005 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CNOT3O75175 753 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 RNASEH2AO75792 299 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 BCAS2O75934 225 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ATE1O95260 518 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 NELFEP18615 380 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 EIF2AK2P19525 551 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ACO1P21399 889 aaKnown RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 GRK2P25098 689 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 GNA15P30679 374 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CDH15P55291 814 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 MS4A2Q01362 244 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CYP24A1Q07973 514 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ATP1A4Q13733 1029 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 IKBKEQ14164 716 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 MROH9Q5TGP6 573 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 TATDN1Q6P1N9 297 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 B3GNT9Q6UX72 402 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 KYQ8NBH2 561 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ADAMTS16Q8TE57 1224 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 FBXL18Q96ME1 805 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 KLHL32Q96NJ5 620 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 LENG8Q96PV6 779 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CDRT15Q96T59 188 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 DOK1Q99704 481 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 TMEM79Q9BSE2 394 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CCDC68Q9H2F9 335 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 GIN1Q9NXP7 522 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 EMCNQ9ULC0 261 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SCN4AP35499 1836 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 TCRBV5S1A1TA0A578 114 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 AIM2O14862 343 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CHADO15335 359 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SLC16A4O15374 487 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 NRLP54845 237 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 TAZQ16635 292 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 WDR78Q5VTH9 848 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 METTL21CQ5VZV1 264 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 TIFABQ6ZNK6 161 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 LYSMD3Q7Z3D4 306 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ZFPM1Q8IX07 1006 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 CPNE9Q8IYJ1 553 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 DSELQ8IZU8 1212 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 NIPA2Q8N8Q9 360 aa8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 ZNF420Q8TAQ5 688 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 SCHIP1Q9P0W5 487 aaPredicted RBP8.25□□□□□ -1.09
HMGXB4-202ENST00000418170 A0A087WXM4 84 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 TMX2-CTNND1H3BSU7 103 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 GPR25O00155 361 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 APOEP02649 317 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 CCDC130P13994 396 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 KCNA4P22459 653 aa8.24□□□□□ -1.09
HMGXB4-202ENST00000418170 ARRB2P32121 409 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms