RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 HNRNPDQ14103 355 aaKnown RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 E2F5Q15329 346 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 SGO2Q562F6 1265 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 DCAF17Q5H9S7 520 aaPredicted RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 TCERG1LQ5VWI1 586 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 FMNL3Q8IVF7 1028 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 ZC3H3Q8IXZ2 948 aaKnown RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 CADM4Q8NFZ8 388 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 UBA3Q8TBC4 463 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 PRCCQ92733 491 aaPredicted RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 CAMK1GQ96NX5 476 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 LRRC4Q9HBW1 653 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 OLA1Q9NTK5 396 aaKnown RBP15.49■□□□□ 0.07
RPS28-201ENST00000417088 HESX1Q9UBX0 185 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 NFE2L3Q9Y4A8 694 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 ZFYVE26Q68DK2 2539 aa15.49■□□□□ 0.07
RPS28-201ENST00000417088 A0A1B0GTW7 788 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 MEI4A8MW99 385 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 H0Y626 953 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 SLC16A3O15427 465 aaKnown RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 TIMM44O43615 452 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 TSPAN3O60637 253 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 TRIM16O95361 564 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 IGLV3-19P01714 112 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 EPHX1P07099 455 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 HOXD9P28356 352 aaPredicted RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 OXTRP30559 389 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 HARS2P49590 506 aaKnown RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 PMS1P54277 932 aaKnown RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 ADIGQ0VDE8 80 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 MPPE1Q53F39 396 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 COBLL1Q53SF7 1204 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 BSPRYQ5W0U4 402 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 ANKRD40Q6AI12 368 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 CHCHD4Q8N4Q1 142 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 UBR7Q8N806 425 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 RNF139Q8WU17 664 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 EDEM1Q92611 657 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 CCDC34Q96HJ3 373 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 ZDHHC5Q9C0B5 715 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 SFMBT1Q9UHJ3 866 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 STOML2Q9UJZ1 356 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 HBS1LQ9Y450 684 aaKnown RBP15.48■□□□□ 0.07
RPS28-201ENST00000417088 PKD1L2Q7Z442 2459 aa15.48■□□□□ 0.07
RPS28-201ENST00000417088 FAM221BA6H8Z2 402 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 YJEFN3A6XGL0 299 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 METTL12A8MUP2 240 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 E7ENQ6 273 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 O00370 1275 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 ACADMP11310 421 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 VDRP11473 427 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 CD19P15391 556 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 HLA-FP30511 346 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 RDXP35241 583 aaKnown RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 LRMPQ12912 555 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 CKAP5Q14008 2032 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 TRIP6Q15654 476 aaKnown RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 ZNF423Q2M1K9 1284 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 PKDCCQ504Y2 493 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 ZNF658Q5TYW1 1059 aaPredicted RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 DCAF12L1Q5VU92 463 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 SERPINA13PQ6UXR4 307 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 CACUL1Q86Y37 369 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 FMR1NBQ8N0W7 255 aaPredicted RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 ZCCHC9Q8N567 271 aaKnown RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 KNL1Q8NG31 2342 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 ZCCHC14Q8WYQ9 949 aaKnown RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 KCTD13Q8WZ19 329 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 IPO9Q96P70 1041 aaKnown RBP15.47■□□□□ 0.07
RPS28-201ENST00000417088 TSG101Q99816 390 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 NUP58Q9BVL2 599 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 MIR1-1HGQ9H1L0 117 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 RMND1Q9NWS8 449 aa15.47■□□□□ 0.07
RPS28-201ENST00000417088 SPEGQ15772 3267 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 SRRM3A6NNA2 597 aaPredicted RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 GABBR2O75899 941 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 HLA-EP13747 358 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 YWHAEP62258 255 aaKnown RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 ARID5AQ03989 594 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 CAMK2GQ13555 558 aaPredicted RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 ADGRF1Q5T601 910 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 RAB44Q7Z6P3 723 aaPredicted RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 NAXDQ8IW45 347 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 SIX6OS1Q8N1H7 587 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 SCML4Q8N228 414 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 OR2T3Q8NH03 318 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 TFAP2BQ92481 460 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 SLC35C1Q96A29 364 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 TMA16Q96EY4 203 aaKnown RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 GSDMAQ96QA5 445 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 TMEM245Q9H330 911 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 ABCC13Q9NSE7 274 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 ARMCX3Q9UH62 379 aaPredicted RBP15.46■□□□□ 0.07
RPS28-201ENST00000417088 KIAA1257Q9ULG3 409 aa15.46■□□□□ 0.07
RPS28-201ENST00000417088 WDFY3Q8IZQ1 3526 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 TRIM49BA6NDI0 452 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 MSI1O43347 362 aaKnown RBP15.45■□□□□ 0.06
RPS28-201ENST00000417088 LATS1O95835 1130 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms