RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PI4KBQ9UBF8 816 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 ISY1Q9ULR0 285 aaKnown RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 EIF3AQ14152 1382 aaKnown RBP4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 KIF14Q15058 1648 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 ADGRL2O95490 1459 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 RALGAPBQ86X10 1494 aa4.24□□□□□ -1.73
HMGB3P23-201ENST00000414981 A0A087WZ62 844 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 FYB1O15117 783 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 RNF8O76064 485 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 TMIGD3P0DMS9 266 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 MYL4P12829 197 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 SLC5A2P31639 672 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 MAN1A1P33908 653 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 ARHGAP25P42331 645 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 STT3AP46977 705 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 TXNL4AP83876 142 aaKnown RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 CCDC15Q0P6D6 951 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 IFIT5Q13325 482 aaKnown RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 LAMB3Q13751 1172 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 MAPRE1Q15691 268 aaKnown RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 ETFDHQ16134 617 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 FAM110CQ1W6H9 321 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 TMTC4Q5T4D3 741 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 FAXCQ5TGI0 409 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 PXDC1Q5TGL8 231 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 GRHL2Q6ISB3 625 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 ANO7Q6IWH7 933 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 DEF8Q6ZN54 512 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 SKAP1Q86WV1 359 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 CNGA4Q8IV77 575 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 PJA1Q8NG27 643 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 C16orf52Q8NHV5 167 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 OSR1Q8TAX0 266 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 COQ8BQ96D53 544 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 P2RY11Q96G91 374 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 SNX27Q96L92 541 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 FCRL4Q96PJ5 515 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 SIGLEC11Q96RL6 698 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 WDR24Q96S15 920 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 GDF15Q99988 308 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 NAA15Q9BXJ9 866 aaKnown RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 VPS16Q9H269 839 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 VPS45Q9NRW7 570 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 KLHL13Q9P2N7 655 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 DNMT1P26358 1616 aaKnown RBP4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 USP47Q96K76 1375 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 FANCD2Q9BXW9 1451 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 KDM5CP41229 1560 aa4.23□□□□□ -1.73
HMGB3P23-201ENST00000414981 DAPK1P53355 1430 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 KIAA1107Q9UPP5 1409 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 A0A1W2PPC4 97 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 ANO9A1A5B4 782 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 OR2W5A6NFC9 320 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 KPNA5O15131 536 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 CA12O43570 354 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 CBFA2T3O75081 653 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 FGBP02675 491 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 LDHCP07864 332 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 IDEP14735 1019 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 TSHRP16473 764 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 PRIM2P49643 509 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 HSF1Q00613 529 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 SIM2Q14190 667 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 TWIST1Q15672 202 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 PFKFB3Q16875 520 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 AASDHQ4L235 1098 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 KLHDC7AQ5VTJ3 777 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 ABLIM2Q6H8Q1 611 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 MRNIPQ6NTE8 343 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 MRPL10Q7Z7H8 261 aaKnown RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 TTC30BQ8N4P2 665 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 SAMD3Q8N6K7 520 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 PDILTQ8N807 584 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 BCAS4Q8TDM0 211 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 OVCA2Q8WZ82 227 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 TBCBQ99426 244 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 NAP1L4Q99733 375 aaKnown RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 ADGRE3Q9BY15 652 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 ARNT2Q9HBZ2 717 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 FAM50BQ9Y247 325 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 PARD3Q8TEW0 1356 aa4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 POLA1P09884 1462 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P23-201ENST00000414981 ZNF521Q96K83 1311 aa4.21□□□□□ -1.73
HMGB3P23-201ENST00000414981 EPRSP07814 1512 aaKnown RBP4.21□□□□□ -1.73
HMGB3P23-201ENST00000414981 TOPBP1Q92547 1522 aa4.21□□□□□ -1.73
HMGB3P23-201ENST00000414981 KDM5DQ9BY66 1539 aa4.21□□□□□ -1.73
HMGB3P23-201ENST00000414981 LAMC1P11047 1609 aa4.21□□□□□ -1.73
HMGB3P23-201ENST00000414981 APAF1O14727 1248 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 APOL1O14791 398 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 TIMM44O43615 452 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 PRAMEF2O60811 474 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 MBPP02686 304 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 ARP10275 920 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 SCP2P22307 547 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 MMP8P22894 467 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 DUSP1P28562 367 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 NR4A2P43354 598 aa4.21□□□□□ -1.74
HMGB3P23-201ENST00000414981 JAK3P52333 1124 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms