RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SLFN11Q7Z7L1 901 aa13.62□□□□□ -0.23
CNOT4-204ENST00000414802 ZSCAN30Q86W11 494 aa13.62□□□□□ -0.23
CNOT4-204ENST00000414802 SMARCD2Q92925 531 aa13.62□□□□□ -0.23
CNOT4-204ENST00000414802 SNRNP25Q9BV90 132 aaKnown RBP13.62□□□□□ -0.23
CNOT4-204ENST00000414802 GDE1Q9NZC3 331 aa13.62□□□□□ -0.23
CNOT4-204ENST00000414802 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
CNOT4-204ENST00000414802 C2CD4DB7Z1M9 353 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 KIF5CO60282 957 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 KLKB1P03952 638 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 CCR1P32246 355 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 PCK1P35558 622 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 ACAP1Q15027 740 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 CA9Q16790 459 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 ATP13A4Q4VNC1 1196 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 NT5DC3Q86UY8 548 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 DENND1CQ8IV53 801 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 PYROXD2Q8N2H3 581 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 HSPH1Q92598 858 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 KRT35Q92764 455 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 LRRC3BQ96PB8 259 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 KXD1Q9BQD3 176 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 WDCPQ9H6R7 721 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 ARHGEF38Q9NXL2 777 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 SH3BP1Q9Y3L3 701 aa13.61□□□□□ -0.23
CNOT4-204ENST00000414802 SOBPA7XYQ1 873 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 GREM1O60565 184 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 PAGE1O75459 146 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 LAMP2P13473 410 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 SLC1A1P43005 524 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 KPNA1P52294 538 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 RING1Q06587 406 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 PPP2R5DQ14738 602 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 SMAD2Q15796 467 aaKnown RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 BRMS1LQ5PSV4 323 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 PIK3R6Q5UE93 754 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 NUGGCQ68CJ6 796 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 TANGO2Q6ICL3 276 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 PARM1Q6UWI2 310 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 SYCE1Q8N0S2 351 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 ATP6V0D2Q8N8Y2 350 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 TDRD5Q8NAT2 981 aaKnown RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 TRIM58Q8NG06 486 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 CD101Q93033 1021 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 RPGRIP1Q96KN7 1286 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 CALR3Q96L12 384 aaKnown RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
CNOT4-204ENST00000414802 AMFRQ9UKV5 643 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 AP4E1Q9UPM8 1137 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 CHD5Q8TDI0 1954 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 COL4A2P08572 1712 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 KIAA1549LQ6ZVL6 1849 aa13.6□□□□□ -0.23
CNOT4-204ENST00000414802 GOLGA6L7A0A1B0GV03 622 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 HEPACAM2A8MVW5 462 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 KCNU1A8MYU2 1149 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 TRDMT1O14717 391 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 RARAP10276 462 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 ADRA1BP35368 520 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 HARS2P49590 506 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 GNG11P61952 73 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 GRM2Q14416 872 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 HADHQ16836 314 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 ZFYVE27Q5T4F4 411 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 RAP1GAP2Q684P5 730 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 NADSYN1Q6IA69 706 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 OTOP3Q7RTS5 596 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 DDX42Q86XP3 938 aaKnown RBP eCLIP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 BBS7Q8IWZ6 715 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 FGF14Q92915 247 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 WDR24Q96S15 920 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 SIK2Q9H0K1 926 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 DHX35Q9H5Z1 703 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 LSM7Q9UK45 103 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 AGO1Q9UL18 857 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 HS3ST4Q9Y661 456 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 NYNRINQ9P2P1 1898 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 ENC1O14682 589 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 KRT1P04264 644 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 SLC2A3P11169 496 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 WEE1P30291 646 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 FAM133BQ5BKY9 247 aaKnown RBP13.59□□□□□ -0.23
CNOT4-204ENST00000414802 EFHC2Q5JST6 749 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 RFWD3Q6PCD5 774 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 VITQ6UXI7 678 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 Q6ZNB5 142 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 CHSY1Q86X52 802 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 UNC45BQ8IWX7 931 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 RHOT1Q8IXI2 618 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms