RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 SGO2Q562F6 1265 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 IGF2-ASQ6U949 168 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 ZNF366Q8N895 744 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 B3GALNT2Q8NCR0 500 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 ARHGAP9Q9BRR9 750 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 GZF1Q9H116 711 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-208ENST00000414711 ST6GALNAC4Q9H4F1 302 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 FBRSQ9HAH7 460 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 EBF2Q9HAK2 575 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 PDE11AQ9HCR9 933 aa16.58■□□□□ 0.24
CPNE1-208ENST00000414711 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-208ENST00000414711 ABCA12Q86UK0 2595 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 DOPEY1Q5JWR5 2465 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 ATP8B3O60423 1300 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 BSNQ9UPA5 3926 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 SIGLEC6O43699 453 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 OPA1O60313 960 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 KRT38O76015 456 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 RBMS1P29558 406 aaKnown RBP16.57■□□□□ 0.24
CPNE1-208ENST00000414711 DDIT3P35638 169 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 ATP5C1P36542 298 aaKnown RBP16.57■□□□□ 0.24
CPNE1-208ENST00000414711 DAB2P98082 770 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 DHX8Q14562 1220 aaKnown RBP16.57■□□□□ 0.24
CPNE1-208ENST00000414711 ZSCAN23Q3MJ62 389 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 FNDC3BQ53EP0 1204 aaKnown RBP16.57■□□□□ 0.24
CPNE1-208ENST00000414711 TMEM215Q68D42 235 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 FAM35AQ86V20 835 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 ANKRD36BP1Q96IX9 119 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 TMEM245Q9H330 911 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 ERVMER34-1Q9H9K5 563 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 CYLDQ9NQC7 956 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 TLR8Q9NR97 1041 aaKnown RBP16.57■□□□□ 0.24
CPNE1-208ENST00000414711 COMMD8Q9NX08 183 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 HSPBP1Q9NZL4 362 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 SATB2Q9UPW6 733 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 MAN2B2Q9Y2E5 1009 aa16.57■□□□□ 0.24
CPNE1-208ENST00000414711 TRIM38O00635 465 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 WNT9AO14904 365 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 TIMM44O43615 452 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 TACC1O75410 805 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 CCR10P46092 362 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 TOB1P50616 345 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-208ENST00000414711 CLN3Q13286 438 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 C3orf38Q5JPI3 329 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 NCEH1Q6PIU2 408 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 HVCN1Q96D96 273 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 CLEC4EQ9ULY5 219 aa16.56■□□□□ 0.24
CPNE1-208ENST00000414711 SPTBN1Q01082 2364 aaKnown RBP16.55■□□□□ 0.24
CPNE1-208ENST00000414711 CLEC18AA5D8T8 446 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 TLR4O00206 839 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 MDM4O15151 490 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 SDC3O75056 442 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 TNNC2P02585 160 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 FAM87AP0C7U9 286 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 GALCP54803 685 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 ZNF211Q13398 564 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-208ENST00000414711 SLC45A4Q5BKX6 768 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 ZNF776Q68DI1 518 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-208ENST00000414711 CLEC18BQ6UXF7 455 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 USP30Q70CQ3 517 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 CLEC18CQ8NCF0 446 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 GANCQ8TET4 914 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 NOC3LQ8WTT2 800 aaKnown RBP16.55■□□□□ 0.24
CPNE1-208ENST00000414711 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 EXTL1Q92935 676 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 SMARCD1Q96GM5 515 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 PSMG3-AS1Q96PY0 264 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 CCNL2Q96S94 520 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-208ENST00000414711 PRSS16Q9NQE7 514 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 INTS13Q9NVM9 706 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 NCKAP1Q9Y2A7 1128 aa16.55■□□□□ 0.24
CPNE1-208ENST00000414711 A0A1B0GVM2 712 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 STC2O76061 302 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 LDHAP00338 332 aaKnown RBP16.54■□□□□ 0.24
CPNE1-208ENST00000414711 ITGB2P05107 769 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 SFTPCP11686 197 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 CHKAP35790 457 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 ANAPC15P60006 121 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 CYB5D2Q8WUJ1 264 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 SLC46A1Q96NT5 459 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 MED10Q9BTT4 135 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 PABPC3Q9H361 631 aaKnown RBP16.54■□□□□ 0.24
CPNE1-208ENST00000414711 FBXO44Q9H4M3 255 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 KRT82Q9NSB4 513 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 TJP2Q9UDY2 1190 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 SERGEFQ9UGK8 458 aa16.54■□□□□ 0.24
CPNE1-208ENST00000414711 UTP20O75691 2785 aaKnown RBP16.53■□□□□ 0.24
CPNE1-208ENST00000414711 A0A1W2PNU3 283 aaPredicted RBP16.53■□□□□ 0.24
CPNE1-208ENST00000414711 LRRC72A6NJI9 287 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 A8MXQ7 604 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 PPP1R37O75864 691 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 KLKB1P03952 638 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 CYBBP04839 570 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 PLA2G4AP47712 749 aa16.53■□□□□ 0.24
CPNE1-208ENST00000414711 KCNA1Q09470 495 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms