RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 HLA-EP13747 358 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 NR2F2P24468 414 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 AFF3P51826 1226 aaKnown RBP22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 SLC8A3P57103 927 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 FNDC3BQ53EP0 1204 aaKnown RBP22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 CPXM2Q8N436 756 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 ARID3AQ99856 593 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 CFAP45Q9UL16 551 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 PLA2G4CQ9UP65 541 aa22.54■■□□□ 1.2
RHBDD3-204ENST00000414672 MAPK13O15264 365 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 TSPAN3O60637 253 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 F13A1P00488 732 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 CCDC157Q569K6 752 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 TMEM215Q68D42 235 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 FAM186BQ8IYM0 893 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 OR2T3Q8NH03 318 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 PLD4Q96BZ4 506 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 PCED1AQ9H1Q7 454 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 LHX5Q9H2C1 402 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 C6orf106Q9H6K1 298 aaPredicted RBP22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 TRAF3IP3Q9Y228 551 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 PCDHGB2Q9Y5G2 931 aa22.53■■□□□ 1.2
RHBDD3-204ENST00000414672 HARS2P49590 506 aaKnown RBP22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 TKTL1P51854 596 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 TEAD4Q15561 434 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 KIF19Q2TAC6 998 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 MPPE1Q53F39 396 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 TMPRSS7Q7RTY8 843 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 PIGZQ86VD9 579 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 CCDC47Q96A33 483 aaKnown RBP22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 UBXN6Q9BZV1 441 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 SNX11Q9Y5W9 270 aa22.52■■□□□ 1.2
RHBDD3-204ENST00000414672 ADAMTS20P59510 1910 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 ZBED1O96006 694 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 RPL13P26373 211 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 ACSL1P33121 698 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 PSMC2P35998 433 aaKnown RBP22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 MARCH9Q86YJ5 346 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 TTC39CQ8N584 583 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 ZNF366Q8N895 744 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 RBBP8NLQ8NC74 664 aaPredicted RBP22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 C1orf216Q8TAB5 229 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 BAHD1Q8TBE0 780 aaPredicted RBP22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 CYB5D2Q8WUJ1 264 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 TMEM176AQ96HP8 235 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 TMEM8AQ9HCN3 771 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 CISHQ9NSE2 258 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 MAPK8IP1Q9UQF2 711 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 BTBD3Q9Y2F9 522 aa22.51■■□□□ 1.19
RHBDD3-204ENST00000414672 A0A1B0GVL5 298 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 DNM1Q05193 864 aaKnown RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 CAMK2GQ13555 558 aaPredicted RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 SOWAHCQ53LP3 525 aaPredicted RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 DBX2Q6ZNG2 339 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 FMNL3Q8IVF7 1028 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 GALNT15Q8N3T1 639 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 SLC4A11Q8NBS3 891 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 RNF139Q8WU17 664 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 NDRG1Q92597 394 aaKnown RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 TMA16Q96EY4 203 aaKnown RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 LRIG1Q96JA1 1093 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 TOR4AQ9NXH8 423 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 USP25Q9UHP3 1055 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 ANKRD6Q9Y2G4 727 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 SLCO1B1Q9Y6L6 691 aa22.5■■□□□ 1.19
RHBDD3-204ENST00000414672 LAMA5O15230 3695 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 KCNK3O14649 394 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 FSBPO95073 299 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 SEMA4FO95754 770 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 MYL1P05976 194 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 PFKFB1P16118 471 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 HOXD9P28356 352 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 ADAM9Q13443 819 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 TRIP4Q15650 581 aaPredicted RBP22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 RAB41Q5JT25 222 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 KRT39Q6A163 491 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 CHST9Q7L1S5 443 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 FAM217AQ8IXS0 508 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 ANKRD52Q8NB46 1076 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 WFIKKN2Q8TEU8 576 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 ULBP1Q9BZM6 244 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 BTBD1Q9H0C5 482 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 TM9SF3Q9HD45 589 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 OLA1Q9NTK5 396 aaKnown RBP22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 ABCB8Q9NUT2 735 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 RCOR1Q9UKL0 485 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 ACACAQ13085 2346 aa22.49■■□□□ 1.19
RHBDD3-204ENST00000414672 DNTTP04053 509 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 HLA-FP30511 346 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 RAD23BP54727 409 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 CYP4F3Q08477 520 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 ADAT2Q7Z6V5 191 aaKnown RBP22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 ENGASEQ8NFI3 743 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 EDEM1Q92611 657 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 SEMA4DQ92854 862 aa22.48■■□□□ 1.19
RHBDD3-204ENST00000414672 IPO9Q96P70 1041 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms