RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 RPL9P32969 192 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 GNALP38405 381 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 LILRA4P59901 499 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CYP27A1Q02318 531 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CYP24A1Q07973 514 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 ELAVL2Q12926 359 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 BFSP1Q12934 665 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SNRNP35Q16560 246 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 KYAT1Q16773 422 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 NKPD1Q17RQ9 610 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 KNOP1Q1ED39 458 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 CTXN3Q4LDR2 81 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MBLAC2Q68D91 279 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 OVCH1Q7RTY7 1134 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 C11orf74Q86VG3 221 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CPNE8Q86YQ8 564 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CD302Q8IX05 232 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MYO1HQ8N1T3 1032 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 XXYLT1Q8NBI6 393 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SMRP1Q8NCR6 262 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 PLEKHO2Q8TD55 490 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SMARCE1Q969G3 411 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 RPGRIP1Q96KN7 1286 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 PTCHD1Q96NR3 888 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 PGLYRP2Q96PD5 576 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TMEM209Q96SK2 561 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CDCA3Q99618 268 aaPredicted RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 FOXP3Q9BZS1 431 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 S1PR5Q9H228 398 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 KCTD10Q9H3F6 313 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 POMKQ9H5K3 350 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 ASB7Q9H672 318 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 C7orf69Q9H7B7 122 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MMRN2Q9H8L6 949 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 RXFP1Q9HBX9 757 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 CATSPERZQ9NTU4 200 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 AP5S1Q9NUS5 200 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SPTLC3Q9NUV7 552 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 STOML1Q9UBI4 398 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MTRRQ9UBK8 725 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MAN1B1Q9UKM7 699 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TCFL5Q9UL49 500 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 AGAP1Q9UPQ3 857 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 SSX2IPQ9Y2D8 614 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 PCDHA5Q9Y5H7 936 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 IRAK3Q9Y616 596 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MYO16Q9Y6X6 1858 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 ZNF638Q14966 1978 aaKnown RBP5.23□□□□□ -1.57
VPS41-205ENST00000414632 DOCK8Q8NF50 2099 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 MYO10Q9HD67 2058 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 GREB1Q4ZG55 1949 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 DENND4CQ5VZ89 1909 aa5.23□□□□□ -1.57
VPS41-205ENST00000414632 TTC28Q96AY4 2481 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 KIF26AQ9ULI4 1882 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 CCDC195A0A1B0GUA6 201 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ANO9A1A5B4 782 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 WDR27A2RRH5 827 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TRIM49BA6NDI0 452 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 FAM47E-STBD1D6RA91 191 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 PIRO00625 290 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 CYB561D2O14569 222 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 FGF10O15520 208 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 CALUO43852 315 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 RHOBTB3O94955 611 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SMC2O95347 1197 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SEC24AO95486 1093 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TNNC2P02585 160 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 MYL1P05976 194 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 C8AP07357 584 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TRIM49P0CI25 452 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TRIM49CP0CI26 452 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ODC1P11926 461 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TNNI1P19237 187 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 NR2F2P24468 414 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ACAT1P24752 427 aaKnown RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 TPP2P29144 1249 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 PRCPP42785 496 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TAF6P49848 677 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 MECP2P51608 486 aaKnown RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 KPNA1P52294 538 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 OXCT1P55809 520 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 DLG4P78352 724 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 NTHL1P78549 312 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 OCRLQ01968 901 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ROR1Q01973 937 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 YWHAHQ04917 246 aaPredicted RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 ZP2Q05996 745 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 KCNB1Q14721 858 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 SMAD2Q15796 467 aaKnown RBP5.22□□□□□ -1.57
VPS41-205ENST00000414632 PTPN21Q16825 1174 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 CCDC142Q17RM4 750 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 MAP9Q49MG5 647 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 LIN9Q5TKA1 542 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 KLHL10Q6JEL2 608 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 ZNF280DQ6N043 979 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 CES5AQ6NT32 575 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 TMEM184AQ6ZMB5 413 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 USP37Q86T82 979 aa5.22□□□□□ -1.57
VPS41-205ENST00000414632 OSTM1Q86WC4 334 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms