RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 UBA1P22314 1058 aaKnown RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 KLRC1P26715 233 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 BEX3Q00994 111 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 NRG1Q02297 640 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 DEUP1Q05D60 604 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 BNIP1Q12981 228 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 LRP8Q14114 963 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 SGSM1Q2NKQ1 1148 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 FOXR2Q6PJQ5 311 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 GALNT15Q8N3T1 639 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 DNERQ8NFT8 737 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 GIMAP5Q96F15 307 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 NRBF2Q96F24 287 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 GAS2L1Q99501 681 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 HSD17B14Q9BPX1 270 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 SELENOSQ9BQE4 189 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 LXNQ9BS40 222 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 TRIM9Q9C026 710 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 UNC93B1Q9H1C4 597 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 TBC1D14Q9P2M4 693 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 MAGED2Q9UNF1 606 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 USP15Q9Y4E8 981 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC42Q9Y546 428 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 KRT87PA6NCN2 255 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 EPHB6O15197 1021 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 SNX3O60493 162 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 UBOX5O94941 541 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 EDNRBP24530 442 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 RPA1P27694 616 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 DNA2P51530 1060 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 ASIC1P78348 528 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 CCL14Q16627 93 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 CLPPQ16740 277 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 DEFB115Q30KQ5 88 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 IZUMO3Q5VZ72 239 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 PGBD2Q6P3X8 592 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 MTHFD1LQ6UB35 978 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 RGS9BPQ6ZS82 235 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 ARMCX2Q7L311 632 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 C19orf47Q8N9M1 422 aaKnown RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 TMEM102Q8N9M5 508 aaPredicted RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 ZNF527Q8NB42 609 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 PCSK9Q8NBP7 692 aaKnown RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 NPLOC4Q8TAT6 608 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 AHCYL2Q96HN2 611 aaKnown RBP9.72□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC3Q9BY71 257 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 FGFBP2Q9BYJ0 223 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 NT5C3AQ9H0P0 336 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 NEUROG2Q9H2A3 272 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 PLXNA1Q9UIW2 1896 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 SPATA31C2B4DYI2 1134 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 KRIT1O00522 736 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.85
SNHG3-201ENST00000413987 DAPK3O43293 454 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 PLA2G4BP0C869 781 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 PORP16435 677 aaPredicted RBP9.71□□□□□ -0.85
SNHG3-201ENST00000413987 CA8P35219 290 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 SCNN1BP51168 640 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.85
SNHG3-201ENST00000413987 KCNJ2P63252 427 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 MXRA7P84157 204 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 GRM2Q14416 872 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 PRAMEF19Q5SWL8 479 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 METTL11BQ5VVY1 283 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 PLA2G4FQ68DD2 849 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 C17orf99Q6UX52 265 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 MAEAQ7L5Y9 396 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 TAOK1Q7L7X3 1001 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 NLRX1Q86UT6 975 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 ERICH1Q86X53 443 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 RASGEF1CQ8N431 466 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 AADATQ8N5Z0 425 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 LENG1Q96BZ8 264 aaPredicted RBP9.71□□□□□ -0.85
SNHG3-201ENST00000413987 EEF2KMTQ96G04 330 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 FMO2Q99518 471 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 RIT2Q99578 217 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 JPH1Q9HDC5 661 aaPredicted RBP9.71□□□□□ -0.85
SNHG3-201ENST00000413987 PDE7BQ9NP56 450 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 DMRT3Q9NQL9 472 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 AGAP1Q9UPQ3 857 aa9.71□□□□□ -0.85
SNHG3-201ENST00000413987 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.71□□□□□ -0.86
SNHG3-201ENST00000413987 RSPH10B2B2RC85 870 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 KPNA5O15131 536 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 FMO6PO60774 539 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 RSPH10BP0C881 870 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GNAT1P11488 350 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 PEX2P28328 305 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ETV1P50549 477 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GALNT1Q10472 559 aaPredicted RBP9.71□□□□□ -0.86
SNHG3-201ENST00000413987 SREBF2Q12772 1141 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 STK4Q13043 487 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 GRB14Q14449 540 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 ZNF792Q3KQV3 632 aa9.71□□□□□ -0.86
SNHG3-201ENST00000413987 BOLA3Q53S33 107 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms