RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 KRT76Q01546 638 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 SMAD1Q15797 465 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 MYLK3Q32MK0 819 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 OGFRL1Q5TC84 451 aaPredicted RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 NIPA1Q7RTP0 329 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 KIAA0319LQ8IZA0 1049 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 C2orf69Q8N8R5 385 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 LRRN4Q8WUT4 740 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 KCNK16Q96T55 309 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 MRPS26Q9BYN8 205 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 NRDE2Q9H7Z3 1164 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 TMEM165Q9HC07 324 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 HEY1Q9Y5J3 304 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 DOCK5Q9H7D0 1870 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 LRRIQ4A6NIV6 560 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CASQ2O14958 399 aaPredicted RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 AP1G1O43747 822 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 PEX1O43933 1283 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 DNAJA2O60884 412 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CRTAMO95727 393 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 C1QAP02745 245 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CCND2P30279 289 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 POLR2BP30876 1174 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 ATXN3P54252 364 aaPredicted RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 RPL26P61254 145 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 DCTN2Q13561 401 aaKnown RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 GK3PQ14409 553 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 PTPN20Q4JDL3 420 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
SIK3-202ENST00000413553 LBX2Q6XYB7 198 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 UNC5AQ6ZN44 842 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 ADGRF2Q8IZF7 708 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 WDTC1Q8N5D0 677 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CGRRF1Q99675 332 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 SIKE1Q9BRV8 207 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CISHQ9NSE2 258 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 PAK5Q9P286 719 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 ARHGAP26Q9UNA1 814 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 CNTN6Q9UQ52 1028 aa9.19□□□□□ -0.94
SIK3-202ENST00000413553 MAGEB3O15480 346 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 CST3P01034 146 aaPredicted RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 PRKCHP24723 683 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 PCSK6P29122 969 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MIPP30301 263 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 IDH3AP50213 366 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 ZNF132P52740 706 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MRPS22P82650 360 aaKnown RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 NOMO1Q15155 1222 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MTERF2Q49AM1 385 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 TEDDM1Q5T9Z0 273 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MBLAC2Q68D91 279 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 TSHZ1Q6ZSZ6 1077 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 KBTBD6Q86V97 674 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 GALNT4Q8N4A0 578 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MCPH1Q8NEM0 835 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 TFB1MQ8WVM0 346 aaKnown RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 TFAP2BQ92481 460 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 HAPLN2Q9GZV7 340 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 KLC2Q9H0B6 622 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.18□□□□□ -0.94
SIK3-202ENST00000413553 MKS1Q9NXB0 559 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 FBXO40Q9UH90 709 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 PSMD13Q9UNM6 376 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 E9PBE3 544 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 TRDMT1O14717 391 aaKnown RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 AIM2O14862 343 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 KLHL41O60662 606 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 ZBED1O96006 694 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 FGF3P11487 239 aaPredicted RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 MAGEA8P43361 318 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 SERPINB8P50452 374 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 HDAC4P56524 1084 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 ENPEPQ07075 957 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 DENND1BQ6P3S1 775 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 CHST13Q8NET6 341 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 AGR3Q8TD06 166 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 APBB2Q92870 758 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 TARS2Q9BW92 718 aaKnown RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 ZNF518BQ9C0D4 1074 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 STN1Q9H668 368 aaKnown RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 RSAD1Q9HA92 442 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 GBA2Q9HCG7 927 aaPredicted RBP9.18□□□□□ -0.94
SIK3-202ENST00000413553 TIMMDC1Q9NPL8 285 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 XPNPEP1Q9NQW7 623 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 MAN1C1Q9NR34 630 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 BTBD7Q9P203 1132 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 ARHGAP28Q9P2N2 729 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 USP18Q9UMW8 372 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 SSX2IPQ9Y2D8 614 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 ZNF510Q9Y2H8 683 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 PCDHA10Q9Y5I2 948 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 SCN4AP35499 1836 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 PHIPQ8WWQ0 1821 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 E2F8A0AVK6 867 aa9.18□□□□□ -0.94
SIK3-202ENST00000413553 HMX2A2RU54 273 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms